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MPF_scaffold_199_2

Organism: MPF_Caldanaerobacter_subterraneus_38_43

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 MC: 1 ASCG 14 / 38
Location: 442..3951

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1388761 species="Bacteria; F UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 999.99
  • Bit_score: 2265
  • Evalue 0.0
Mfd; transcription-repair coupling factor KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 999.99
  • Bit_score: 2260
  • Evalue 0.0
  • rbh
Transcription-repair coupling factor-superfamily II helicase similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 2260
  • Evalue 0.0

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Taxonomy

Caldanaerobacter subterraneus → Caldanaerobacter → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3510
ATGTTTACAGTGCAGATTGAAGAATTAAAAGAAGTAAAAGCGATAGAGGAAGAGTTAAAGCAAGGAAGAGGACCTGTTTTGATATACGGCCTTGCAGATTCTCAAAAAGCTCACATAGCGCATTATCTCATGAAGAAATTTAATAAAAAGGTCCTAGTGATAACCCCTGACGATGTGGAGGCAAGGAGAATATACGAAGACCTGTACTCCTTTAATGAAGGGGAGGCTTTTCTTTTCCCTAAAAGGGATATAGTGTTTTACAAAATAGACGCAGCAAGCCACGAAATCGTATTTGAGAGACTTAAAGTGATAAAAAGGCTTTCTGAAGATAGGCCTTATGCTGTTGTTGCTTCTGTAGATGCTTTACTTGACAGGATGCCCCCTTTTTACCTTTTTAGAAAGTATCAGTTCACCATTAAAGTTGGCGATAGAATTGACTTAGAAGATTTTCTGAAAAAATTACAGGTAATGGGATATGAGAGAGTGCAGATGGTGGAAGGGAAAGGGCAGTTCAGCGTAAGAGGCGGGATAATCGATATTTTTCCTTCCACTGAAGAGTATCCTTTCAGGATAGAGCTTTTTGACGATGAAGTGGATTCTTTGAGGACTTTTGATGTCATGACACAGAGGTCTATTAAAACAGCAGAAGAGGTTTTTATCTTCCCGGCTACTGAATTTATAGTGGAAGAAGAACACATAAAAAGAGGAATATCTTCTCTGTCAAAGGACTTAAATTCATATCTTTCAAAAATCAGGAAGACAAAAAGTGGAATGGCCGAAAAGTTAAGAGAGAAGTTTGACGAGATAATGGAAGAGATAAGCCAGGGGAAAAAGAGGGAGAGCATAAAGGTGCTCATAAACTATTTTTACGAAGACCTTCAATCCATCAAGGATTACGTAGGAGAAGATGCTATTGTAATTTTGGATGAGACAAACAGGATTAAGCAGAGGGTAAGTAATCTGCAATTAGAATTTAATGAAAATTTCAAAAATTTACTAGAAAGAGGAGAAGTGATCCCTGAGCAGAGAGAAATTTTCTTTGACTACACTGAAGTAGAGGAAAGGCTCAAAAACAATTTTTTGGTAATAATGAACACATTAACGAAGCCGGAGGGAGAACTTTACCCGCAAAGGATTGTTAATTTTGTATCAAGGTCTATGCACTCTTTCCACGGAAAAATGGACCTTCTTGTGGAGGACCTTAAGTACTACAAAGCGACTGGATATAGAGTGCTTCTTTTAAGCGGCAATAAGGATAGGGCAAAGATTTTGAAGGAGACTTTGGATGAGTACGGCATTGACTCTGTTGTGGTGGAGGATAAGGAATATGACATACAAAGAGGGCAGGTGGTGATATACCCTGCTTCCATCACAAAAGGGTTTGAATACGTGGATGCTAAATTTGCGGTTATAAGCGATAGCGAAATATTTGGGCAAACTAAGAGGGCTAGAAAGCCTGTTAAGATGAAAAACGCTGAGAGGATAAAGAGTTTTACTGAGTTGGAAGTGGGCTCATATGTAGTGCATGTCAATTACGGCATTGGCAAGTATGAAGGGATAGAGAAGATAAAGGTGGACGGAGTCATAAGGGATTATTTGAAGATAGTTTACGCCGGAGGCGATGTGCTGTTTGTGCCTGTTGAGCAATTAGACCTTGTTCAAAAGTACGTAGGGCCTACTGACAATCCTCCAAAGCTTAACAAGCTTGGAGGAGGCGAGTGGATAAGAGCTAAGAGAAAAGCTAAAAAGGCGGCAGAAGACCTGGCAAAGGATTTAATCCAGCTTTACGCTAAAAGGCAGATGGCGAAAGGACATGCCTTTTCTCCCGATACGCCGTGGCAGAAGGAGTTTGAGGACCAGTTTCCCTATGAAGAGACTGAAGACCAGTTAAGGTGCATAAAAGAGATCAAAGAAGATATGGAAAAGGATAAGCCAATGGACAGACTTCTCTGCGGAGACGTGGGTTACGGGAAAACAGAGGTGGCTTTAAGGGCTGCTTTTAAAGCGGTGGCTGATGGTAAGCAGGTGGCGTTTTTGTGCCCTACTACTATTTTAGCTTATCAGCATTATACCAATTTTTTGGAAAGGTTTAAGGAGTTCCCTGTTAAGATAGAAATGTTAAGTCGCTTCAGGACTCCAAAAGAGCAGGCTCAGATAATTAAAGGGCTGGCGGACGGGACTATTGACATAGTAGTCGGAACCCACAGGCTTTTGCAAAACGATGTGAAATTTAAGGATTTGGGGCTTTTGATAATAGACGAGGAGCAGAGGTTTGGGGTGGTCCACAAGGAAAAGATTAAAAAGCTTAAGGAAAACATAGACGTTTTGACTCTTTCTGCAACGCCTATACCTAGGACACTGCACATGTCCTTAATTGGAATTAGGGATATGAGCATACTGGAAAATCCTCCTGAGGACAGGTTTCCTGTGGAGACCTATGTGGTGGAATTTAACGAAGAGCTCATAAAGGACGCTATTCTAAGAGAAGTGGGAAGAGGAGGACAGGTGTACTTTGTATACAACAGAGTACAGGGAATAGAGAAAATGGCTAATTTTATAAAGGAATTGGTGCCAAATTGCAGAATTGCAGTTGCCCACGGGCAGATGGAAGAAAGCAAGCTGGAGCAGGTTATGGTGGATTTCTTGAAAGGGGAATACGATGTACTTGTGACTACCACTATAATTGAGACAGGGCTTGACATACCAAATGTGAATACCATAATAGTGTACGATGCGGATAAGCTGGGGCTTGCACAGCTTTATCAGCTGAGGGGAAGGGTAGGAAGGTCAAATAGGCTGGCTTACGCTTATTTTACCTACAGAAAAGATAAGGTGCTAAGCGAGGTGGCAGAAAAGAGGCTTAATGCCATAAAAGAGTTTACTGAATTTGGTTCAGGTTTTAAAATTGCCATGAGGGATTTGGAGATAAGAGGAGCGGGAAATTTGCTCGGTGCAGAACAGCACGGGCACATTGATGCCGTTGGCTATGACCTTTATCTTAAGCTTTTAGAAGAGGCCATAAGGAATCTCAAAGGGGAACAGCCAAAGGAGGAAATAACTACCACTATAGATTTAAAAGTGAGCGCCTACATCGATTCCTCTTACATTGAGGATGAAAACTTAAGGCTTGAAATGTACAAGAAGATAGCTTCTATAGAGTCAAGAGAGGATATGATGGAGGTAGCAGAAGAGCTTATAGACAGGTTTGGCGATTATCCAAAGCCTGTTGAAGCACTTTTAGATATAGCCTATATAAAAGCGGTTGCGTCAAAACTTCACATAGTGGAAATAAGTGAAAAATCGAGTGGCGTAATTTTAAAGTTTAAAGATAAAGACTCTGTTGACATGGAAACTGTAGAAAAAATGGTAAGAGAGTACAAGGGCAACCTCACTTTTTCAAGCCAGTATCCGCCCTATCTTACTTATAAATACAACAAAAAAGAGACTTTGCTGAAAGAATTGATAGAACTTTTGGAGAAAATGAAAGATTTGCAGTTGGCAAAGAAATAA
PROTEIN sequence
Length: 1170
MFTVQIEELKEVKAIEEELKQGRGPVLIYGLADSQKAHIAHYLMKKFNKKVLVITPDDVEARRIYEDLYSFNEGEAFLFPKRDIVFYKIDAASHEIVFERLKVIKRLSEDRPYAVVASVDALLDRMPPFYLFRKYQFTIKVGDRIDLEDFLKKLQVMGYERVQMVEGKGQFSVRGGIIDIFPSTEEYPFRIELFDDEVDSLRTFDVMTQRSIKTAEEVFIFPATEFIVEEEHIKRGISSLSKDLNSYLSKIRKTKSGMAEKLREKFDEIMEEISQGKKRESIKVLINYFYEDLQSIKDYVGEDAIVILDETNRIKQRVSNLQLEFNENFKNLLERGEVIPEQREIFFDYTEVEERLKNNFLVIMNTLTKPEGELYPQRIVNFVSRSMHSFHGKMDLLVEDLKYYKATGYRVLLLSGNKDRAKILKETLDEYGIDSVVVEDKEYDIQRGQVVIYPASITKGFEYVDAKFAVISDSEIFGQTKRARKPVKMKNAERIKSFTELEVGSYVVHVNYGIGKYEGIEKIKVDGVIRDYLKIVYAGGDVLFVPVEQLDLVQKYVGPTDNPPKLNKLGGGEWIRAKRKAKKAAEDLAKDLIQLYAKRQMAKGHAFSPDTPWQKEFEDQFPYEETEDQLRCIKEIKEDMEKDKPMDRLLCGDVGYGKTEVALRAAFKAVADGKQVAFLCPTTILAYQHYTNFLERFKEFPVKIEMLSRFRTPKEQAQIIKGLADGTIDIVVGTHRLLQNDVKFKDLGLLIIDEEQRFGVVHKEKIKKLKENIDVLTLSATPIPRTLHMSLIGIRDMSILENPPEDRFPVETYVVEFNEELIKDAILREVGRGGQVYFVYNRVQGIEKMANFIKELVPNCRIAVAHGQMEESKLEQVMVDFLKGEYDVLVTTTIIETGLDIPNVNTIIVYDADKLGLAQLYQLRGRVGRSNRLAYAYFTYRKDKVLSEVAEKRLNAIKEFTEFGSGFKIAMRDLEIRGAGNLLGAEQHGHIDAVGYDLYLKLLEEAIRNLKGEQPKEEITTTIDLKVSAYIDSSYIEDENLRLEMYKKIASIESREDMMEVAEELIDRFGDYPKPVEALLDIAYIKAVASKLHIVEISEKSSGVILKFKDKDSVDMETVEKMVREYKGNLTFSSQYPPYLTYKYNKKETLLKELIELLEKMKDLQLAKK*