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MPF_scaffold_199

Alias: MPF_Firmicutes_38_45_23

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_199_1
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

67..435
DNA (369bp) protein (123aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM25690.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_199_2
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

442..3951
DNA (3510bp) protein (1170aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1388761 species="Bacteria; F
Mfd; transcription-repair coupling factor rbh
Transcription-repair coupling factor-superfamily II helicase
MPF_scaffold_199_3
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

3997..4917
DNA (921bp) protein (307aa)
Foldase protein PrsA {ECO:0000256|HAMAP-Rule:MF_01145}; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_01145};; Flags: Precursor;; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterale
SurA2; parvulin-like peptidyl-prolyl isomerase rbh
Foldase protein PrsA
MPF_scaffold_199_4
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

5018..5569
DNA (552bp) protein (184aa)
transcription regulator SpoVT rbh
Transcription regulator spoVT {ECO:0000313|EMBL:AAM25687.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldan
Transcription regulator spoVT
MPF_scaffold_199_5
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

5606..6493
DNA (888bp) protein (296aa)
hypothetical protein rbh
Peptidase {ECO:0000313|EMBL:ERM91060.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterra
Peptidase U57, YabG
MPF_scaffold_199_6
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

6671..6943
DNA (273bp) protein (91aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM25685.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_199_7
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

7050..8576
DNA (1527bp) protein (509aa)
LytE4; LysM repeat-containing protein rbh
LysM-repeat proteins and domains {ECO:0000313|EMBL:AAM25684.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cal
LysM-repeat proteins and domains
MPF_scaffold_199_8
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

8670..9533
DNA (864bp) protein (288aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase rbh
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
MPF_scaffold_199_9
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

9530..10207
DNA (678bp) protein (226aa)
GntR; transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:AAM25682.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaero
Transcriptional regulator
MPF_scaffold_199_10
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

10213..10932
DNA (720bp) protein (240aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAM25681.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_199_11
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

10985..11227
DNA (243bp) protein (81aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM25680.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_199_12
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11237..12835
DNA (1599bp) protein (533aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAM25679.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_199_13
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

12822..13919
DNA (1098bp) protein (366aa)
spore germination protein rbh
Spore germination protein homolog yndE {ECO:0000313|EMBL:AAM25678.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" sourc
Spore germination protein homolog yndE
MPF_scaffold_199_14
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

13916..15070
DNA (1155bp) protein (385aa)
germination protein rbh
Germination protein {ECO:0000313|EMBL:AAM25677.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter
Germination protein
MPF_scaffold_199_15
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

15149..15778
DNA (630bp) protein (210aa)
Stage II sporulation protein R {ECO:0000313|EMBL:ERM91050.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cald
pro-sigma-E processing factor spoIIR rbh
Pro-sigma-E processing factor spoIIR
MPF_scaffold_199_16
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

15872..16576
DNA (705bp) protein (235aa)
spore cortex-lytic enzyme prepeptide rbh
Spore cortex-lytic enzyme prepeptide {ECO:0000313|EMBL:AAM25675.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source=
Spore cortex-lytic enzyme prepeptide
MPF_scaffold_199_17
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

16587..17921
DNA (1335bp) protein (445aa)
Germination protein YpeB {ECO:0000313|EMBL:EEB75470.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerob
hypothetical protein rbh
Germination protein YpeB
MPF_scaffold_199_18
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

17988..18185
DNA (198bp) protein (66aa)
small, acid-soluble spore proteins, alpha/be
Putative uncharacterized protein {ECO:0000313|EMBL:EEB75471.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cal
Small, acid-soluble spore proteins, alpha/be
MPF_scaffold_199_19
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

18245..19057
DNA (813bp) protein (271aa)
MhpC4; alpha/beta hydrolase rbh
Predicted hydrolases or acyltransferases (Alpha/beta hydrolase superfamily) {ECO:0000313|EMBL:AAM25672.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerob
Predicted hydrolases or acyltransferases (Alpha/beta hydrolase superfamily)
MPF_scaffold_199_20
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

19063..20670
DNA (1608bp) protein (536aa)
UDP-N-acetylmuramyl pentapeptide synthase {ECO:0000313|EMBL:KKC28729.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" so
MurF; UDP-N-acetylmuramyl pentapeptide synthase rbh
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
MPF_scaffold_199_21
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

20682..21851
DNA (1170bp) protein (390aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000
DdlA2; D-alanine--D-alanine ligase rbh
D-alanine--D-alanine ligase
MPF_scaffold_199_22
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

21920..22051
DNA (132bp) protein (44aa)
Putative uncharacterized protein {ECO:0000313|EMBL:EEB75381.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cal
Putative uncharacterized protein
MPF_scaffold_199_23
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

22522..22602
DNA (81bp) protein (27aa)
Site-specific integrase-resolvase {ECO:0000313|EMBL:KKC28715.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Ca
Putative site-specific integrase-resolvase (Fragment)
Displaying 23 items

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