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MPF_scaffold_59

Alias: MPF_Thermococcus_sibiricus_41_94_12

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Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_59_1
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

1..564
DNA (564bp) protein (188aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS89663.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
MPF_scaffold_59_2
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(629..2392)
DNA (1764bp) protein (588aa)
Putative oxidative cyclase {ECO:0000313|EMBL:ACS89664.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (st
oxidative cyclase rbh
Putative oxidative cyclase
MPF_scaffold_59_3
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

2472..3017
DNA (546bp) protein (182aa)
Rubrerythrin-related protein rbh
Rubrerythrin-related protein {ECO:0000313|EMBL:ACS89665.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (
Rubrerythrin-related protein
MPF_scaffold_59_4
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

3286..3762
DNA (477bp) protein (159aa)
rubrerythrin-related protein rbh
Rubrerythrin-related protein {ECO:0000313|EMBL:ACS89666.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (
Rubrerythrin-related protein
MPF_scaffold_59_5
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


comp(3752..4573)
DNA (822bp) protein (274aa)
ksgA; dimethyladenosine transferase (EC:2.1.1.-) rbh
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000255|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000255|HAMAP-Rul
Probable ribosomal RNA small subunit methyltransferase A
MPF_scaffold_59_6
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(4576..5202)
DNA (627bp) protein (209aa)
RNA-binding protein
Predicted RNA-binding protein {ECO:0000313|EMBL:ACS89668.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus
Predicted RNA-binding protein
MPF_scaffold_59_7
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(5280..5642)
DNA (363bp) protein (121aa)
DNA-directed RNA polymerase, subunit F (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit F {ECO:0000313|EMBL:ACS89669.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ACS89669.1};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcac
DNA-directed RNA polymerase, subunit F
MPF_scaffold_59_8
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


comp(5648..5941)
DNA (294bp) protein (98aa)
50S ribosomal protein L21
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;"
50S ribosomal protein L21e
MPF_scaffold_59_9
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(6065..7237)
DNA (1173bp) protein (391aa)
tRNA pseudouridine synthase Pus10 {ECO:0000256|HAMAP-Rule:MF_01893}; EC=5.4.99.- {ECO:0000256|HAMAP-Rule:MF_01893};; tRNA pseudouridine 54/55 synthase {ECO:0000256|HAMAP-Rule:MF_01893}; TaxID=604354 s
pseudouridylate synthase
tRNA pseudouridine synthase Pus10
MPF_scaffold_59_10
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

7283..7576
DNA (294bp) protein (98aa)
transcriptional regulator consisting of an HTH domain fused to a Zn-ribbon
Predicted transcriptional regulator consisting of an HTH domain fused to a Zn-ribbon {ECO:0000313|EMBL:ACS89672.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococ
Predicted transcriptional regulator consisting of an HTH domain fused to a Zn-ribbon
MPF_scaffold_59_11
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

7641..8960
DNA (1320bp) protein (440aa)
glutamyl-tRNA(Gln) amidotransferase subunit D (EC:6.3.5.7) rbh
Glutamyl-tRNA(Gln) amidotransferase subunit D {ECO:0000256|HAMAP-Rule:MF_00586, ECO:0000256|RuleBase:RU004457}; Short=Glu-ADT subunit D {ECO:0000256|HAMAP-Rule:MF_00586};; EC=6.3.5.- {ECO:0000256|HAMA
Glutamyl-tRNA(Gln) amidotransferase subunit D
MPF_scaffold_59_12
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

8960..10849
DNA (1890bp) protein (630aa)
glutamyl-tRNA(Gln) amidotransferase subunit E (EC:6.3.5.7)
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000255|HAMAP-Rule:MF_00588}; Short=Glu-ADT subunit E {ECO:0000255|HAMAP-Rule:MF_00588};; EC=6.3.5.- {ECO:0000255|HAMAP-Rule:MF_00588};; TaxID=604354
Glutamyl-tRNA(Gln) amidotransferase subunit E
MPF_scaffold_59_13
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

10907..11530
DNA (624bp) protein (208aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS89675.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
MPF_scaffold_59_14
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

11593..12168
DNA (576bp) protein (192aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS89676.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
MPF_scaffold_59_15
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(12165..13388)
DNA (1224bp) protein (408aa)
3-hydroxy-3-methylglutaryl-CoA reductase (EC:1.1.1.34) rbh
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.34 {ECO:0000256|RuleBase:RU361219};; TaxID=604354 sp
3-hydroxy-3-methylglutaryl-CoA reductase
MPF_scaffold_59_16
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(13417..14175)
DNA (759bp) protein (253aa)
Cell division inhibitor minD like protein rbh
Cell division inhibitor minD like protein {ECO:0000313|EMBL:ACS89678.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcu
Cell division inhibitor minD like protein
MPF_scaffold_59_17
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(14288..14524)
DNA (237bp) protein (79aa)
RNA-binding protein, containing TRAM domain
Predicted RNA-binding protein, containing TRAM domain {ECO:0000313|EMBL:ACS89679.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source=
Predicted RNA-binding protein, containing TRAM domain
MPF_scaffold_59_18
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

14710..15768
DNA (1059bp) protein (353aa)
tdh; L-threonine 3-dehydrogenase (EC:1.1.1.103) rbh
Probable L-threonine 3-dehydrogenase {ECO:0000313|EMBL:ACS89680.1}; EC=1.1.1.103 {ECO:0000313|EMBL:ACS89680.1};; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcac
Probable L-threonine 3-dehydrogenase
MPF_scaffold_59_19
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


15857..17368
DNA (1512bp) protein (504aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00282}; EC=6.1.1.20 {ECO:0000255|HAMAP-Rule:MF_00282};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00282}
Phenylalanine--tRNA ligase alpha subunit
MPF_scaffold_59_20
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists


17375..19057
DNA (1683bp) protein (561aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20) rbh
Phenylalanine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000255|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00284};
Phenylalanine--tRNA ligase beta subunit
MPF_scaffold_59_21
unknown

Not on your lists

comp(19106..19207)
DNA (102bp) protein (34aa)
MPF_scaffold_59_22
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

19386..20186
DNA (801bp) protein (267aa)
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000255|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000255|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000255|HAMAP-Rule:MF_00171}; tRNA pseudouridy
tRNA pseudouridine synthase A
MPF_scaffold_59_23
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(20173..21543)
DNA (1371bp) protein (457aa)
DNA/RNA repair helicase
Predicted DNA/RNA repair helicase {ECO:0000313|EMBL:ACS89684.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiri
Predicted DNA/RNA repair helicase
MPF_scaffold_59_24
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

21694..22962
DNA (1269bp) protein (423aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase rbh
3-octaprenyl-4-hydroxybenzoate decarboxylyase {ECO:0000313|EMBL:ACS89685.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermoc
3-octaprenyl-4-hydroxybenzoate decarboxylyase
MPF_scaffold_59_25
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(22974..23756)
DNA (783bp) protein (261aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2) rbh
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925}
Pyrroline-5-carboxylate reductase
MPF_scaffold_59_26
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(23976..25253)
DNA (1278bp) protein (426aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1) rbh
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.- {ECO:0000256|HAM
Serine hydroxymethyltransferase
MPF_scaffold_59_27
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

25363..26130
DNA (768bp) protein (256aa)
NAD-dependent deacetylase (EC:3.5.1.-)
NAD-dependent protein deacylase {ECO:0000255|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000255|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000255|HAMAP-Rule:MF_01121}; TaxID=604354 specie
NAD-dependent protein deacylase
MPF_scaffold_59_28
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

26139..26534
DNA (396bp) protein (132aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS89689.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
MPF_scaffold_59_29
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

26570..27289
DNA (720bp) protein (240aa)
Hydrolase, HAD superfamily
Hydrolase, HAD superfamily {ECO:0000313|EMBL:ACS89690.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (st
Hydrolase, HAD superfamily
MPF_scaffold_59_30
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

27255..27818
DNA (564bp) protein (188aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS89691.1}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus sibiricus (strai
Uncharacterized protein
Displaying items 1-30 of 45 in total

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