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MPF_scaffold_4

Alias: MPF_Firmicutes_41_162_2

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Displaying items 1-30 of 137 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_4_1
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..532
DNA (531bp) protein (177aa)
riboflavin synthase subunit alpha
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:AET68782.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus
Riboflavin synthase, alpha subunit
MPF_scaffold_4_2
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

547..1755
DNA (1209bp) protein (403aa)
Riboflavin biosynthesis protein RibBA Tax=S_Thermoanaerobacterales_50_218
3,4-dihydroxy-2-butanone 4-phosphate synthase
Riboflavin biosynthesis protein RibBA
MPF_scaffold_4_3
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

1806..2273
DNA (468bp) protein (156aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000255|HAMAP-Rule:MF_00178}; Short=DMRL synthase {ECO:0000255|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000255|HAMAP-Rule:MF_00178};; Short=Lumazine synthase
6,7-dimethyl-8-ribityllumazine synthase
MPF_scaffold_4_4
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

2956..3186
DNA (231bp) protein (77aa)
small acid-soluble spore protein alpha/beta type
Small acid-soluble spore protein alpha/beta type {ECO:0000313|EMBL:ACX51299.1}; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group;
Small acid-soluble spore protein alpha/beta type
MPF_scaffold_4_5
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3267..4244)
DNA (978bp) protein (326aa)
germination protease (EC:3.4.24.78)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-
Germination protease
MPF_scaffold_4_6
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

4369..5388
DNA (1020bp) protein (340aa)
Putative uncharacterized protein Tax=S_Thermoanaerobacterales_50_218
hypothetical protein
Uncharacterized protein
MPF_scaffold_4_7
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5487..5786
DNA (300bp) protein (100aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus
hypothetical protein
Uncharacterized protein
MPF_scaffold_4_8
unknown

Not on your lists

5939..6148
DNA (210bp) protein (70aa)
MPF_scaffold_4_9
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

6290..6856
DNA (567bp) protein (189aa)
methyltransferase
Methyltransferase {ECO:0000313|EMBL:ACX51291.1}; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex
Methyltransferase
MPF_scaffold_4_10
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6860..7312
DNA (453bp) protein (151aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ84711.1}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum
Putative uncharacterized protein
MPF_scaffold_4_11
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7330..8190)
DNA (861bp) protein (287aa)
sporulation integral membrane protein YlbJ
Sporulation integral membrane protein YlbJ {ECO:0000313|EMBL:ACB84933.1}; Flags: Precursor;; TaxID=457570 species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius
Sporulation integral membrane protein YlbJ
MPF_scaffold_4_12
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8174..8572)
DNA (399bp) protein (133aa)
nucleoside recognition
Nucleoside recognition {ECO:0000313|EMBL:ABC19255.1}; Flags: Precursor;; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorel
Nucleoside recognition
MPF_scaffold_4_13
Thermoanaerobacter sp. YS13, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

8744..9958
DNA (1215bp) protein (405aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1511746 species="Bacteria; Firmicutes; Clostridia;
acetate kinase
Acetate kinase
MPF_scaffold_4_14
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

10018..10542
DNA (525bp) protein (175aa)
putative metal-binding protein, possibly nucleic-acid binding protein Tax=Caldatribacterium californiense
hypothetical protein
Uncharacterized protein
MPF_scaffold_4_15
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


10570..10749
DNA (180bp) protein (60aa)
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azor
50S ribosomal protein L32
50S ribosomal protein L32
MPF_scaffold_4_16
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

10976..11548
DNA (573bp) protein (191aa)
Transcription factor fapR Tax=S_Thermoanaerobacterales_50_218
regulatory protein DeoR
Regulatory protein DeoR
MPF_scaffold_4_17
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11561..12586
DNA (1026bp) protein (342aa)
Phosphate acyltransferase {ECO:0000255|HAMAP-Rule:MF_00019}; EC=2.3.1.n2 {ECO:0000255|HAMAP-Rule:MF_00019};; Acyl-ACP phosphotransacylase {ECO:0000255|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]
phosphate:acyl-[acyl carrier protein] acyltransferase
Phosphate acyltransferase
MPF_scaffold_4_18
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

12571..13575
DNA (1005bp) protein (335aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3
MPF_scaffold_4_19
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

13605..14549
DNA (945bp) protein (315aa)
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP68365.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
2-nitropropane dioxygenase
2-nitropropane dioxygenase, NPD
MPF_scaffold_4_20
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14571..15506
DNA (936bp) protein (312aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clo
ACP S-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase
MPF_scaffold_4_21
Geobacillus sp. Y4.1MC1, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15513..16259
DNA (747bp) protein (249aa)
3-oxoacyl-(acyl-carrier-protein) reductase
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ADP75415.1}; TaxID=581103 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. (strain Y
3-oxoacyl-(Acyl-carrier-protein) reductase
MPF_scaffold_4_22
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

16331..16567
DNA (237bp) protein (79aa)
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaero
acyl carrier protein
Acyl carrier protein
MPF_scaffold_4_23
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

16684..17943
DNA (1260bp) protein (420aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterale
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41) rbh
3-oxoacyl-[acyl-carrier-protein] synthase 2
MPF_scaffold_4_24
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

17940..18653
DNA (714bp) protein (238aa)
rnc; ribonuclease 3 (EC:3.1.26.3)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule
Ribonuclease 3
MPF_scaffold_4_25
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

18745..22293
DNA (3549bp) protein (1183aa)
chromosome segregation protein SMC
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; T
Chromosome partition protein Smc
MPF_scaffold_4_26
Syntrophomonas wolfei, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22308..23237
DNA (930bp) protein (310aa)
signal recognition particle GTPase-like protein
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=335541 species="Bacteria; Firmicutes; Clostridia; Clostridiale
Signal recognition particle receptor FtsY
MPF_scaffold_4_27
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

23237..24037
DNA (801bp) protein (267aa)
mtaP; 5'-methylthioadenosine phosphorylase (EC:2.4.2.28)
Probable 6-oxopurine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01963};; Purine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; TaxID
Probable 6-oxopurine nucleoside phosphorylase
MPF_scaffold_4_28
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24059..25111
DNA (1053bp) protein (351aa)
translation initiation factor, aIF-2BI family (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:00
Methylthioribose-1-phosphate isomerase
MPF_scaffold_4_29
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25108..26394
DNA (1287bp) protein (429aa)
amidohydrolase
5-methylthioadenosine/S-adenosylhomocysteine deaminase
Tax=BJP_08E140C01_Clostridiales_46_19
MPF_scaffold_4_30
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26462..26827
DNA (366bp) protein (122aa)
DNA-binding protein
Signal recognition particle associated protein
Tax=BJP_IG2158_Thermincola_46_17
Displaying items 1-30 of 137 in total

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