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MPF_scaffold_48

Alias: MPF_Firmicutes_41_162_15

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Displaying items 1-30 of 54 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_48_1
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(101..490)
DNA (390bp) protein (130aa)
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:ACX52242.1}; TaxID=429009 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammo
PadR family transcriptional regulator
Transcriptional regulator, PadR-like family
MPF_scaffold_48_2
unknown

Not on your lists

742..909
DNA (168bp) protein (56aa)
MPF_scaffold_48_3
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

1086..1718
DNA (633bp) protein (211aa)
nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
Probable nicotinate-nucleotide adenylyltransferase
MPF_scaffold_48_4
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

1770..2435
DNA (666bp) protein (222aa)
Metall dependent phosphohydrolyase YqeK Tax=S_Thermoanaerobacterales_50_218
metal dependent phosphohydrolase
Metal dependent phosphohydrolase
MPF_scaffold_48_5
Bacillaceae bacterium MTCC 8252, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2428..2796
DNA (369bp) protein (123aa)
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1123719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; unclassified Bacillaceae.;" source="Bacillaceae bacter
ribosomal silencing factor RsfS
Ribosomal silencing factor RsfS
MPF_scaffold_48_6
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


3115..5604
DNA (2490bp) protein (830aa)
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000255|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00049}; Short=LeuRS {ECO:0000255|HAMAP-Rule:MF_
Leucine--tRNA ligase
MPF_scaffold_48_7
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

5691..6320
DNA (630bp) protein (210aa)
Competence protein ComEA Tax=S_Thermoanaerobacterales_50_218
competence protein ComEA helix-hairpin-helix domain-containing protein
Competence protein ComEA helix-hairpin-helix region
MPF_scaffold_48_8
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6340..6642
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:EAX47026.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans N
hypothetical protein
Putative uncharacterized protein
MPF_scaffold_48_9
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

6644..9037
DNA (2394bp) protein (798aa)
DNA internalization-related competence protein ComEC/Rec2
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:ABC18905.1}; Flags: Precursor;; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaero
DNA internalization-related competence protein ComEC/Rec2
MPF_scaffold_48_10
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9018..10082
DNA (1065bp) protein (355aa)
DNA polymerase III subunit delta
DNA polymerase III, delta subunit {ECO:0000313|EMBL:ADG83301.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strai
DNA polymerase III, delta subunit
MPF_scaffold_48_11
Drosophila persimilis, Drosophila, Diptera, Insecta, Arthropoda, Eukaryota

Not on your lists

comp(10126..10311)
DNA (186bp) protein (62aa)
GL21368
MPF_scaffold_48_12
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(10416..10685)
DNA (270bp) protein (90aa)
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM
s20: ribosomal protein S20
30S ribosomal protein S20
MPF_scaffold_48_13
Syntrophomonas wolfei, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10905..11237
DNA (333bp) protein (111aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI68751.1}; Flags: Precursor;; TaxID=335541 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntroph
Putative uncharacterized protein
MPF_scaffold_48_14
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11387..12553
DNA (1167bp) protein (389aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABC18908.1}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moor
Putative uncharacterized protein
MPF_scaffold_48_15
unknown

Not on your lists

12680..13087
DNA (408bp) protein (136aa)
MPF_scaffold_48_16
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13111..14679
DNA (1569bp) protein (523aa)
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1629719 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
mviN2; virulence factor MviN
Virulence factor MviN
MPF_scaffold_48_17
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14754..16565
DNA (1812bp) protein (604aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
GTP-binding protein LepA
Elongation factor 4
MPF_scaffold_48_18
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16513..17715
DNA (1203bp) protein (401aa)
putative oxygen-independent coproporphyrinogen III oxidase
Putative oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:AEV69324.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" s
UPI0001E2C6C0 related cluster
MPF_scaffold_48_19
unknown

Not on your lists

17749..17898
DNA (150bp) protein (50aa)
MPF_scaffold_48_20
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17976..19007
DNA (1032bp) protein (344aa)
HrcA; transcriptional regulator of heat shock gene
Heat-inducible transcription repressor HrcA
Tax=BJP_IG2158_Thermincola_46_17
MPF_scaffold_48_21
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19019..19765
DNA (747bp) protein (249aa)
GrpE protein HSP-70 cofactor
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiale
Protein GrpE
MPF_scaffold_48_22
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

19821..21656
DNA (1836bp) protein (612aa)
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
dnaK; molecular chaperone DnaK
Chaperone protein DnaK
MPF_scaffold_48_23
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

21761..22924
DNA (1164bp) protein (388aa)
chaperone DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorel
Chaperone protein DnaJ
MPF_scaffold_48_24
Thermoanaerobacterium xylanolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

22946..23896
DNA (951bp) protein (317aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
50S ribosomal protein L11 methyltransferase
Ribosomal protein L11 methyltransferase
MPF_scaffold_48_25
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23914..24681
DNA (768bp) protein (256aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; P
hypothetical protein
Ribosomal RNA small subunit methyltransferase E
MPF_scaffold_48_26
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

24686..25993
DNA (1308bp) protein (436aa)
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP68233.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
MiaB family RNA modification protein
RNA modification enzyme, MiaB family
MPF_scaffold_48_27
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

26030..26377
DNA (348bp) protein (116aa)
histidine triad (HIT) protein
Histidine triad (HIT) protein {ECO:0000313|EMBL:ABC18919.1}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source
Histidine triad (HIT) protein
MPF_scaffold_48_28
Methanobacterium formicicum DSM 3637, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

26465..26833
DNA (369bp) protein (123aa)
Signal transduction histidine kinase
MPF_scaffold_48_29
RIFOXYD2_FULL_Proteobacteria_50_16_curated, Proteobacteria, Bacteria

Not on your lists

27072..27473
DNA (402bp) protein (134aa)
multi-sensor hybrid histidine kinase (EC:2.7.3.-)
multi-sensor hybrid histidine kinase Tax=RIFOXYD2_FULL_Proteobacteria_50_16_curated
Two-component hybrid sensor and regulator
MPF_scaffold_48_30
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

27637..27864
DNA (228bp) protein (76aa)
multi-sensor hybrid histidine kinase
Putative PAS domain protein
Tax=BJP_IG2103_Bacteroidetes_37_22
Displaying items 1-30 of 54 in total

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