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MPF_scaffold_84

Alias: MPF_Firmicutes_41_162_18

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Displaying items 1-30 of 38 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_84_1
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..701)
DNA (699bp) protein (233aa)
2-isopropylmalate synthase
2-isopropylmalate synthase/homocitrate synthase family protein
Tax=BJP_IG2158_Thermincola_46_17
MPF_scaffold_84_2
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(698..1780)
DNA (1083bp) protein (361aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
3-isopropylmalate dehydrogenase
MPF_scaffold_84_3
Peptococcaceae bacterium BRH_c4a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1773..2273)
DNA (501bp) protein (167aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate is
3-isopropylmalate dehydratase small subunit (EC:4.2.1.35)
3-isopropylmalate dehydratase small subunit
MPF_scaffold_84_4
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2274..3536)
DNA (1263bp) protein (421aa)
3-isopropylmalate dehydratase large subunit
3-isopropylmalate dehydratase large subunit
Tax=BJP_IG2158_Thermincola_46_17
MPF_scaffold_84_5
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3581..5116)
DNA (1536bp) protein (512aa)
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase Tax=S_Thermoanaerobacterales_50_218
2-isopropylmalate synthase
MPF_scaffold_84_6
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5142..5639)
DNA (498bp) protein (166aa)
ilvH; acetolactate synthase small subunit IlvH (EC:2.2.1.6)
Acetolactate synthase small subunit IlvH {ECO:0000313|EMBL:AFV12180.1}; EC=2.2.1.6 {ECO:0000313|EMBL:AFV12180.1};; TaxID=1089553 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Ther
Acetolactate synthase small subunit IlvH
MPF_scaffold_84_7
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5645..7387)
DNA (1743bp) protein (581aa)
IlvB; thiamine pyrophosphate-requiring enzymes
Acetolactate synthase
Tax=BJP_08E140C01_Clostridiales_46_19
MPF_scaffold_84_8
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7421..9088)
DNA (1668bp) protein (556aa)
ilvD; dihydroxy-acid dehydratase IlvD (EC:4.2.1.9)
Dihydroxy-acid dehydratase Tax=S_Thermoanaerobacterales_50_218
Dihydroxy-acid dehydratase
MPF_scaffold_84_9
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9100..9981)
DNA (882bp) protein (294aa)
IlvE; branched-chain amino acid aminotransferase (EC:2.6.1.42) rbh
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase {ECO:0000313|EMBL:BAF58706.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotom
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
MPF_scaffold_84_10
Syntrophomonas zehnderi, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10379..10573)
DNA (195bp) protein (65aa)
Uncharacterized {ECO:0000313|EMBL:CFW99774.1}; TaxID=690567 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;"
Uncharacterized protein
MPF_scaffold_84_11
unknown

Not on your lists

10695..10934
DNA (240bp) protein (80aa)
MPF_scaffold_84_12
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11012..11515)
DNA (504bp) protein (168aa)
Uncharacterized protein {ECO:0000313|EMBL:CCJ34353.1}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
protein of unknown function DUF6 transmembrane
Uncharacterized protein
MPF_scaffold_84_13
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11567..12178)
DNA (612bp) protein (204aa)
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ADL06827.1}; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosedim
Radical SAM domain protein
MPF_scaffold_84_14
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12190..12417)
DNA (228bp) protein (76aa)
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP69320.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
FmdB family regulatory protein
Regulatory protein, FmdB family
MPF_scaffold_84_15
Moorella thermoacetica, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12468..13574)
DNA (1107bp) protein (369aa)
metal dependent phosphohydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ABC20550.1}; TaxID=264732 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" sou
Metal dependent phosphohydrolase
MPF_scaffold_84_16
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13770..14426
DNA (657bp) protein (219aa)
signaling protein
Hypothetical signaling protein {ECO:0000313|EMBL:BAF58946.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropio
Hypothetical signaling protein
MPF_scaffold_84_17
unknown

Not on your lists

comp(14458..15123)
DNA (666bp) protein (222aa)
MPF_scaffold_84_18
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(15197..15568)
DNA (372bp) protein (124aa)
DsrE; hypothetical protein; K07235 tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] Tax=RBG_16_Chloroflexi_51_9_curated
DsrE family protein
DsrE family protein
MPF_scaffold_84_19
Peptococcaceae bacterium BRH_c4a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16419..16757
DNA (339bp) protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS03337.1}; TaxID=1629716 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4a.;"
ABC-type transport system, involved in lipoprotein release, permease component
Putative uncharacterized protein
MPF_scaffold_84_20
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16771..17199
DNA (429bp) protein (143aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV63638.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (
Putative uncharacterized protein
MPF_scaffold_84_21
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17478..18812
DNA (1335bp) protein (445aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS15290.1}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
hypothetical protein
Putative uncharacterized protein
MPF_scaffold_84_22
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18825..19994
DNA (1170bp) protein (390aa)
RND transporter {ECO:0000313|EMBL:KFD41381.1}; TaxID=1487582 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
RND family efflux transporter, MFP subunit
Efflux transporter, RND family, MFP subunit
MPF_scaffold_84_23
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20165..21016
DNA (852bp) protein (284aa)
Nitrilase {ECO:0000313|EMBL:KEO85128.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;"
hydrolase
Uncharacterized protein (Fragment)
MPF_scaffold_84_24
unknown

Not on your lists

comp(21228..21716)
DNA (489bp) protein (163aa)
MPF_scaffold_84_25
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22099..23151
DNA (1053bp) protein (351aa)
Putative membrane protein YeiH {ECO:0000313|EMBL:CDF59143.1}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM
hypothetical protein
Uncharacterized protein family UPF0324
MPF_scaffold_84_26
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

23184..24098
DNA (915bp) protein (305aa)
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP67020.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
LysR family transcriptional regulator
Transcriptional regulator, LysR family
MPF_scaffold_84_27
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24182..24718)
DNA (537bp) protein (179aa)
rubrerythrin
Rubrerythrin {ECO:0000313|EMBL:AEG13718.1}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM
Rubrerythrin
MPF_scaffold_84_28
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24873..25481)
DNA (609bp) protein (203aa)
ZIP zinc transporter family protein
ZIP zinc transporter family protein {ECO:0000313|EMBL:ABB15580.1}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="
ZIP zinc transporter family protein
MPF_scaffold_84_29
unknown

Not on your lists

comp(25478..25612)
DNA (135bp) protein (45aa)
MPF_scaffold_84_30
Pseudothermotoga thermarum, Pseudothermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(25735..26484)
DNA (750bp) protein (250aa)
ApbE family lipoprotein
ApbE family lipoprotein {ECO:0000313|EMBL:AEH50617.1}; TaxID=688269 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Pseudothermotoga.;" source="Pseudothermotoga thermarum DSM 5069.;"
ApbE family lipoprotein
Displaying items 1-30 of 38 in total

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