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MPF_scaffold_340

Alias: MPF_Firmicutes_41_162_22

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_340_1
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(2..205)
DNA (204bp) protein (68aa)
riboflavin synthase, alpha subunit (EC:2.5.1.9)
Riboflavin synthase alpha subunit {ECO:0000313|EMBL:CDC94112.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
Riboflavin synthase, alpha subunit
MPF_scaffold_340_2
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(232..1389)
DNA (1158bp) protein (386aa)
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD Tax=S_Thermoanaerobacterales_50_218
Riboflavin biosynthesis protein RibD
MPF_scaffold_340_3
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1386..2051)
DNA (666bp) protein (222aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461, ECO:0000313|EMBL:CEP38886.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostrid
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase
MPF_scaffold_340_4
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2055..2939)
DNA (885bp) protein (295aa)
Putative ribosome biogenesis GTPase RsgA Tax=S_Thermoanaerobacterales_50_218
ribosome small subunit-dependent GTPase A
Putative ribosome biogenesis GTPase RsgA
MPF_scaffold_340_5
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(2951..4789)
DNA (1839bp) protein (613aa)
Genome assembly strain_NMP_1 {ECO:0000313|EMBL:CEP69437.1}; TaxID=55779 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="
serine/threonine protein kinase
Serine/threonine protein kinase
MPF_scaffold_340_6
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4821..5531)
DNA (711bp) protein (237aa)
protein serine/threonine phosphatase (EC:3.1.3.16)
Protein serine/threonine phosphatase {ECO:0000313|EMBL:ACV63120.1}; EC=3.1.3.16 {ECO:0000313|EMBL:ACV63120.1};; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; D
Protein serine/threonine phosphatase
MPF_scaffold_340_7
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5547..6590)
DNA (1044bp) protein (348aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
Cfr family radical SAM protein
Probable dual-specificity RNA methyltransferase RlmN
MPF_scaffold_340_8
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6669..8036)
DNA (1368bp) protein (456aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pep
Sun; tRNA and rRNA cytosine-C5-methylases
tRNA and rRNA cytosine-C5-methylases
MPF_scaffold_340_9
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8118..8813)
DNA (696bp) protein (232aa)
peptidase membrane zinc metallopeptidase putative
Peptidase membrane zinc metallopeptidase putative
Tax=BJP_08E140C01_Clostridiales_46_19
MPF_scaffold_340_10
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8887..9681)
DNA (795bp) protein (265aa)
Uncharacterized protein {ECO:0000313|EMBL:CCO07184.1}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermal
hypothetical protein
Uncharacterized protein
MPF_scaffold_340_11
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(9671..10651)
DNA (981bp) protein (327aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=55779 species="Ba
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase
MPF_scaffold_340_12
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10668..11120)
DNA (453bp) protein (151aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase
MPF_scaffold_340_13
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11133..13562)
DNA (2430bp) protein (810aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1629719 species="Bacteria;
primosomal protein N'
Helicase PriA essential for oriC/DnaA-independent DNA replication
MPF_scaffold_340_14
Thermoanaerobacter wiegelii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13851..15056)
DNA (1206bp) protein (402aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:AEM78884.1}; TaxID=697303 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaer
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase
MPF_scaffold_340_15
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(15089..15283)
DNA (195bp) protein (65aa)
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] Tax=CSP1_3_Armatimonadetes
DNA-directed RNA polymerase subunit omega
DNA-directed RNA polymerase subunit omega
MPF_scaffold_340_16
Thermoanaerobacter thermohydrosulfuricus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15294..15698)
DNA (405bp) protein (135aa)
guanylate kinase (EC:2.7.4.8)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
Guanylate kinase
Displaying 16 items

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