ggKbase home page

MPI_scaffold_95

Alias: MPI_JS1_34_150_partial_24

Search features with annotation key words

Displaying 28 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_95_1

Not on your lists

comp(2..181)
DNA (180bp) protein (60aa)
Marine sediment metagenome DNA, contig: S12H4_S06204 {ECO:0000313|EMBL:GAI93461.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
MPI_scaffold_95_2

Not on your lists

comp(453..1331)
DNA (879bp) protein (293aa)
Marine sediment metagenome DNA, contig: S12H4_C00951 {ECO:0000313|EMBL:GAI71231.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
cytoplasmic protein
Hypothetical cytosolic protein
MPI_scaffold_95_3

Not on your lists

comp(1315..2115)
DNA (801bp) protein (267aa)
Marine sediment metagenome DNA, contig: S01H4_C00429 {ECO:0000313|EMBL:GAG72239.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Transcriptional regulator
Uncharacterized protein
MPI_scaffold_95_4

Not on your lists

comp(2438..3349)
DNA (912bp) protein (304aa)
Marine sediment metagenome DNA, contig: S12H4_S14627 {ECO:0000313|EMBL:GAJ04826.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Cathepsin C
MPI_scaffold_95_5

Not on your lists

comp(3787..6183)
DNA (2397bp) protein (799aa)
Marine sediment metagenome DNA, contig: S01H4_S19253 {ECO:0000313|EMBL:GAH16947.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
NTPase (NACHT family)
Putative NTPase (NACHT family)
MPI_scaffold_95_6

Not on your lists

comp(6411..7199)
DNA (789bp) protein (263aa)
Marine sediment metagenome DNA, contig: S01H1_S26499 {ECO:0000313|EMBL:GAG30483.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
MPI_scaffold_95_7
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(7186..7872)
DNA (687bp) protein (229aa)
hypothetical protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
MPI_scaffold_95_8

Not on your lists

comp(8760..9692)
DNA (933bp) protein (311aa)
Uncharacterized protein {ECO:0000313|EMBL:KKO02744.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Uncharacterized protein
MPI_scaffold_95_9
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9799..10806)
DNA (1008bp) protein (336aa)
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AHF08867.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455
Putative transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
MPI_scaffold_95_10

Not on your lists

comp(10857..13481)
DNA (2625bp) protein (875aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS81986.1}; TaxID=1619011 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWC1_43_10.;"
hypothetical protein
Uncharacterized protein
MPI_scaffold_95_11
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13611..14279)
DNA (669bp) protein (223aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFM33675.1}; TaxID=1196835 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutz
Uncharacterized protein
MPI_scaffold_95_12
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(14299..17583)
DNA (3285bp) protein (1095aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI79797.1}; TaxID=639282 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Deferribacter.;" source="Deferribacter desulfuricans (str
Uncharacterized protein
MPI_scaffold_95_13

Not on your lists

comp(17726..18223)
DNA (498bp) protein (166aa)
Marine sediment metagenome DNA, contig: S06H3_S26173 {ECO:0000313|EMBL:GAI56418.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
MPI_scaffold_95_14
Streptomyces sp. FR1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18538..22746)
DNA (4209bp) protein (1403aa)
DEAD/DEAH box helicase domain-containing protein {ECO:0000313|EMBL:AHE38701.1}; TaxID=349971 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyce
dead/deah box helicase domain-containing protein
DEAD/DEAH box helicase
MPI_scaffold_95_15
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22926..23546)
DNA (621bp) protein (207aa)
Uncharacterized protein {ECO:0000313|EMBL:KKH17143.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina maze
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_95_16
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23860..24456)
DNA (597bp) protein (199aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL68783.1}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (str
Putative uncharacterized protein
MPI_scaffold_95_17

Not on your lists

comp(24584..27739)
DNA (3156bp) protein (1052aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN41744.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
helicase domain-containing protein
Helicase domain-containing protein
MPI_scaffold_95_18
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

comp(27739..31443)
DNA (3705bp) protein (1235aa)
hypothetical protein Tax=RBG_13_Caldithrix_44_9_curated
hypothetical protein rbh
Uncharacterized protein
MPI_scaffold_95_19
unknown

Not on your lists

comp(31491..32408)
DNA (918bp) protein (306aa)
MPI_scaffold_95_20
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

33529..36519
DNA (2991bp) protein (997aa)
helicase Tax=RBG_13_Actinobacteria_35_12_curated
helicase
Helicase
MPI_scaffold_95_21

Not on your lists

36852..37901
DNA (1050bp) protein (350aa)
Marine sediment metagenome DNA, contig: S12H4_L00295 {ECO:0000313|EMBL:GAI87542.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
MPI_scaffold_95_22

Not on your lists

38265..38474
DNA (210bp) protein (70aa)
Marine sediment metagenome DNA, contig: S12H4_S24941 {ECO:0000313|EMBL:GAJ19620.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Sigma-70 family RNA polymerase sigma factor
MPI_scaffold_95_23

Not on your lists

38871..39011
DNA (141bp) protein (47aa)
Marine sediment metagenome DNA, contig: S06H3_L00045 {ECO:0000313|EMBL:GAI17706.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
MPI_scaffold_95_24

Not on your lists

39168..39440
DNA (273bp) protein (91aa)
Marine sediment metagenome DNA, contig: S12H4_L01232 {ECO:0000313|EMBL:GAI85736.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
MPI_scaffold_95_25

Not on your lists

39563..39943
DNA (381bp) protein (127aa)
Marine sediment metagenome DNA, contig: S01H1_L02241 {ECO:0000313|EMBL:GAF72470.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
MPI_scaffold_95_26

Not on your lists

40078..40494
DNA (417bp) protein (139aa)
Marine sediment metagenome DNA, contig: S01H1_C00202 {ECO:0000313|EMBL:GAF73600.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
peptidase M15A
Peptidase M15A
MPI_scaffold_95_27

Not on your lists

comp(40986..41882)
DNA (897bp) protein (299aa)
Marine sediment metagenome DNA, contig: S01H4_S02959 {ECO:0000313|EMBL:GAG85767.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
glycosidase-like protein
Glycosidase PH1107-related protein
MPI_scaffold_95_28

Not on your lists

comp(41879..42361)
DNA (483bp) protein (161aa)
Marine sediment metagenome DNA, contig: S03H2_S07805 {ECO:0000313|EMBL:GAH48034.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Uncharacterized protein
Displaying 28 items

View Taxonomy