ggKbase home page

MPI_scaffold_57

Alias: MPI_Clostridia_34_121_2

Search features with annotation key words

Displaying items 1-30 of 41 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_57_1

Not on your lists

2..1261
DNA (1260bp) protein (420aa)
Marine sediment metagenome DNA, contig: S01H1_C00469 {ECO:0000313|EMBL:GAF77812.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
dihydropyrimidine dehydrogenase subunit A
Glutamate synthase (NADPH), homotetrameric
MPI_scaffold_57_2
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

1258..2154
DNA (897bp) protein (299aa)
homocysteine S-methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] Tax=RBG_19FT_COMBO_JS1_35_14_curated
homocysteine S-methyltransferase
Homocysteine S-methyltransferase/B12 binding domain/Pterin binding enzyme
MPI_scaffold_57_3
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

2583..3287
DNA (705bp) protein (235aa)
antitermination regulatory protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
antitermination regulatory protein
Predicted antitermination regulatory protein, ANTAR and GAF domain
MPI_scaffold_57_4
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

3662..4963
DNA (1302bp) protein (434aa)
glutamate dehydrogenase; K00260 glutamate dehydrogenase [EC:1.4.1.2] Tax=CG_OP9-01
glutamate dehydrogenase (EC:1.4.1.2 1.4.1.3)
Glutamate dehydrogenase
MPI_scaffold_57_5
Caldicellulosiruptor owensensis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

5027..6451
DNA (1425bp) protein (475aa)
pyruvate carboxyltransferase rbh
Pyruvate carboxyltransferase {ECO:0000313|EMBL:ADQ03961.1}; TaxID=632518 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicell
Pyruvate carboxyltransferase
MPI_scaffold_57_6
Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

6486..8426
DNA (1941bp) protein (647aa)
aconitate hydratase
Aconitate hydratase {ECO:0000313|EMBL:ADQ07839.1}; TaxID=632292 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosirupt
Aconitate hydratase
MPI_scaffold_57_7
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

8630..9628
DNA (999bp) protein (333aa)
isocitrate/isopropylmalate dehydrogenase; K00030 isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] Tax=CG_OP9-01
isocitrate dehydrogenase (EC:1.1.1.41)
Isocitrate dehydrogenase (NAD(+))
MPI_scaffold_57_8

Not on your lists

9806..10165
DNA (360bp) protein (120aa)
carA; carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
carA; Carbamoylphosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] alias=gwa2_scaffold_1009_14 id=5045049 tax=GW2011_AR10 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteria organism_desc=gwa2_.44_58 (temp)
MPI_scaffold_57_9

Not on your lists

10286..11947
DNA (1662bp) protein (554aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Marine sediment metagenome DNA, contig: S01H1_C00031 {ECO:0000313|EMBL:GAF70537.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Dihydroxy-acid dehydratase
MPI_scaffold_57_10
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

12646..14322
DNA (1677bp) protein (559aa)
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6); K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] Tax=RBG_19FT_COMBO_JS1_35_14_curated
acetolactate synthase, large subunit
Acetolactate synthase
MPI_scaffold_57_11

Not on your lists

14319..14822
DNA (504bp) protein (168aa)
acetolactate synthase small subunit (EC:2.2.1.6)
Marine sediment metagenome DNA, contig: S01H1_C00269 {ECO:0000313|EMBL:GAF74682.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Acetolactate synthase, small subunit
MPI_scaffold_57_12
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

14914..15909
DNA (996bp) protein (332aa)
ketol-acid reductoisomerase; K00053 ketol-acid reductoisomerase [EC:1.1.1.86] Tax=RBG_19FT_COMBO_JS1_35_14_curated
ilvC; ketol-acid reductoisomerase IlvC (EC:1.1.1.86)
Ketol-acid reductoisomerase
MPI_scaffold_57_13
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

16219..17040
DNA (822bp) protein (274aa)
pheA; prephenate dehydratase (EC:4.2.1.51) Tax=RBG_19FT_COMBO_JS1_35_14_curated
pheA; putative prephenate dehydratase (EC:4.2.1.51)
Chorismate mutase / prephenate dehydratase
MPI_scaffold_57_14

Not on your lists

17088..18620
DNA (1533bp) protein (511aa)
Marine sediment metagenome DNA, contig: S03H2_C00612 {ECO:0000313|EMBL:GAH22863.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
2-isopropylmalate synthase
2-isopropylmalate synthase
MPI_scaffold_57_15

Not on your lists

18754..20316
DNA (1563bp) protein (521aa)
Marine sediment metagenome DNA, contig: S03H2_C01080 {ECO:0000313|EMBL:GAH28903.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
2-isopropylmalate synthase
Isopropylmalate/homocitrate/citramalate synthases
MPI_scaffold_57_16
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

20444..21604
DNA (1161bp) protein (387aa)
hypothetical protein Tax=CG_OP9-01
hypothetical protein
Uncharacterized ferredoxin oxidoreductase MJ0100
MPI_scaffold_57_17

Not on your lists

21838..22245
DNA (408bp) protein (136aa)
Marine sediment metagenome DNA, contig: S01H4_C00737 {ECO:0000313|EMBL:GAG74526.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
NIL domain-containing protein
NIL domain protein
MPI_scaffold_57_18

Not on your lists

22276..23028
DNA (753bp) protein (251aa)
Marine sediment metagenome DNA, contig: S01H4_C02191 {ECO:0000313|EMBL:GAG57818.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_57_19
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

23372..24187
DNA (816bp) protein (272aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2); K00286 pyrroline-5-carboxylate reductase [EC:1.5.1.2] Tax=RBG_19FT_COMBO_JS1_35_14_curated
pyrroline-5-carboxylate reductase
Pyrroline-5-carboxylate reductase
MPI_scaffold_57_20
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

24226..25992
DNA (1767bp) protein (589aa)
hypothetical protein Tax=CG_Woesearch_01
hypothetical protein
Uncharacterized protein
MPI_scaffold_57_21

Not on your lists

26037..26681
DNA (645bp) protein (215aa)
Marine sediment metagenome DNA, contig: S01H4_C00185 {ECO:0000313|EMBL:GAG66949.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
methyltransferase cognate corrinoid protein
Methyltransferase cognate corrinoid protein
MPI_scaffold_57_22

Not on your lists

26688..27488
DNA (801bp) protein (267aa)
Marine sediment metagenome DNA, contig: S01H4_C00185 {ECO:0000313|EMBL:GAG66943.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
dihydropteroate synthase DHPS
Dihydropteroate synthase DHPS
MPI_scaffold_57_23
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

27577..28440
DNA (864bp) protein (288aa)
methylenetetrahydrofolate reductase Tax=CG_OP9-01
5,10-methylenetetrahydrofolate reductase
Methylenetetrahydrofolate reductase
MPI_scaffold_57_24

Not on your lists

28561..29172
DNA (612bp) protein (204aa)
Marine sediment metagenome DNA, contig: S01H4_C00185 {ECO:0000313|EMBL:GAG66935.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Vitamin B12 dependent methionine synthase activation subunit
Vitamin B12 dependent methionine synthase activation region
MPI_scaffold_57_25
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

29275..30537
DNA (1263bp) protein (421aa)
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RBG_13_Actinobacteria_35_12_curated
3-isopropylmalate dehydratase large subunit
3-isopropylmalate dehydratase large subunit
MPI_scaffold_57_26

Not on your lists

30539..31048
DNA (510bp) protein (170aa)
Marine sediment metagenome DNA, contig: S01H4_C00296 {ECO:0000313|EMBL:GAG69968.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
3-isopropylmalate dehydratase small subunit
3-isopropylmalate dehydratase small subunit
MPI_scaffold_57_27
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

31041..32201
DNA (1161bp) protein (387aa)
3-isopropylmalate dehydrogenase (EC:1.1.1.85); K00052 3-isopropylmalate dehydrogenase [EC:1.1.1.85] Tax=CG_OP9-01
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase
MPI_scaffold_57_28
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

32445..33137
DNA (693bp) protein (231aa)
GntR family transcriptional regulator Tax=RBG_13_Actinobacteria_35_12_curated
GntR family transcriptional regulator
Putative uncharacterized protein
MPI_scaffold_57_29
S_Thermacetogenium_phaeum_55_64, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

33291..34262
DNA (972bp) protein (324aa)
acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha (EC:1.1.1.-)
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha Tax=S_Thermacetogenium_phaeum_55_64
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha
MPI_scaffold_57_30
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

34255..35238
DNA (984bp) protein (328aa)
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=CG_Omnitr_02
TPP-dependent acetoin dehydrogenase complex, E1 protein subunit beta
Transketolase central region
Displaying items 1-30 of 41 in total

View Taxonomy