ggKbase home page

MPI_scaffold_148

Alias: MPI_Clostridia_34_121_4

Search features with annotation key words

Displaying 26 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_148_1

Not on your lists

comp(3..773)
DNA (771bp) protein (257aa)
Marine sediment metagenome DNA, contig: S01H4_C01173 {ECO:0000313|EMBL:GAG63788.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component
MPI_scaffold_148_2

Not on your lists

comp(766..1659)
DNA (894bp) protein (298aa)
Marine sediment metagenome DNA, contig: S01H4_C01173 {ECO:0000313|EMBL:GAG63783.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
CUT1 family carbohydrate ABC transporter membrane protein 1
Carbohydrate ABC transporter membrane protein 1, CUT1 family
MPI_scaffold_148_3

Not on your lists

comp(1778..3016)
DNA (1239bp) protein (413aa)
Marine sediment metagenome DNA, contig: S01H4_C03839 {ECO:0000313|EMBL:GAG62301.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
UgpB; sugar-binding periplasmic protein
Extracellular solute-binding protein, family 1
MPI_scaffold_148_4

Not on your lists

comp(3231..4325)
DNA (1095bp) protein (365aa)
Marine sediment metagenome DNA, contig: S01H4_S03372 {ECO:0000313|EMBL:GAG75445.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
transcriptional regulator
Transcriptional regulator
MPI_scaffold_148_5
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(4496..6226)
DNA (1731bp) protein (577aa)
glycosidase; K00690 sucrose phosphorylase [EC:2.4.1.7] Tax=RBG_19FT_COMBO_JS1_35_14_curated
glycosidase
Putative sucrose phosphorylase
MPI_scaffold_148_6

Not on your lists

comp(6294..7118)
DNA (825bp) protein (275aa)
Marine sediment metagenome DNA, contig: S01H1_L05760 {ECO:0000313|EMBL:GAF67537.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
LacI family transcriptional regulator
Regulatory protein, LacI:Periplasmic binding protein/LacI transcriptional regulator
MPI_scaffold_148_7

Not on your lists

comp(7331..8674)
DNA (1344bp) protein (448aa)
Marine sediment metagenome DNA, contig: S12H4_C00835 {ECO:0000313|EMBL:GAI70122.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
glycosyl transferase group 1
Glycosyl transferase group 1
MPI_scaffold_148_8
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(8781..11426)
DNA (2646bp) protein (882aa)
glycoside hydrolase family protein; K15524 mannosylglycerate hydrolase [EC:3.2.1.170] Tax=RBG_19FT_COMBO_JS1_35_14_curated
glycoside hydrolase family protein
Glycoside hydrolase, family 38
MPI_scaffold_148_9

Not on your lists

comp(11615..12841)
DNA (1227bp) protein (409aa)
Marine sediment metagenome DNA, contig: S01H4_C00336 {ECO:0000313|EMBL:GAG70762.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Transcriptional regulator, CdaR
Sugar diacid utilization regulator SdaR
MPI_scaffold_148_10

Not on your lists

13539..14648
DNA (1110bp) protein (370aa)
Marine sediment metagenome DNA, contig: S01H4_C00028 {ECO:0000313|EMBL:GAG61846.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Tetratricopeptide repeat protein
MPI_scaffold_148_11

Not on your lists

14982..15977
DNA (996bp) protein (332aa)
Marine sediment metagenome DNA, contig: S01H4_C00028 {ECO:0000313|EMBL:GAG61851.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_148_12

Not on your lists

comp(16145..17020)
DNA (876bp) protein (292aa)
Marine sediment metagenome DNA, contig: S01H4_C00028 {ECO:0000313|EMBL:GAG61855.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel
MPI_scaffold_148_13
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(17478..20075)
DNA (2598bp) protein (866aa)
ClpA; ATPase with chaperone activity, ATP-binding subunit; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=CG_OP9-01
ClpA; ATPase with chaperone activity, ATP-binding subunit
ATPase with chaperone activity, ATP-binding subunit
MPI_scaffold_148_14
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(20068..21198)
DNA (1131bp) protein (377aa)
HisC; histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] Tax=CG_OP9-01
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase
MPI_scaffold_148_15

Not on your lists

comp(21252..21956)
DNA (705bp) protein (235aa)
Marine sediment metagenome DNA, contig: S12H4_L00384 {ECO:0000313|EMBL:GAI74838.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
B3/4 domain-containing protein
B3/4 domain protein
MPI_scaffold_148_16

Not on your lists

comp(22112..22639)
DNA (528bp) protein (176aa)
Marine sediment metagenome DNA, contig: S12H4_C00797 {ECO:0000313|EMBL:GAI69563.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Uncharacterized protein
MPI_scaffold_148_17

Not on your lists

23076..24077
DNA (1002bp) protein (334aa)
Marine sediment metagenome DNA, contig: S01H4_C01403 {ECO:0000313|EMBL:GAG68248.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Ca2+/Na+ antiporter
Ca2+/Na+ antiporter
MPI_scaffold_148_18
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

24673..26016
DNA (1344bp) protein (448aa)
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20] Tax=CG_OP9-01
diaminopimelate decarboxylase
Diaminopimelate decarboxylase
MPI_scaffold_148_19
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

26033..27268
DNA (1236bp) protein (412aa)
lysC; aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4] Tax=CG_OP9-01
aspartate kinase (EC:2.7.2.4)
Aspartokinase
MPI_scaffold_148_20

Not on your lists

27477..28361
DNA (885bp) protein (295aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
Marine sediment metagenome DNA, contig: S03H2_L05332 {ECO:0000313|EMBL:GAH32639.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
4-hydroxy-tetrahydrodipicolinate synthase
MPI_scaffold_148_21

Not on your lists

28365..29165
DNA (801bp) protein (267aa)
dapB2; dihydrodipicolinate reductase (EC:1.3.1.26)
Marine sediment metagenome DNA, contig: S01H4_C02302 {ECO:0000313|EMBL:GAG59487.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
4-hydroxy-tetrahydrodipicolinate reductase
MPI_scaffold_148_22

Not on your lists

29555..30418
DNA (864bp) protein (288aa)
diaminopimelate epimerase (EC:5.1.1.7)
Marine sediment metagenome DNA, contig: S01H4_C00293 {ECO:0000313|EMBL:GAG69888.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Diaminopimelate epimerase
MPI_scaffold_148_23

Not on your lists

30886..32055
DNA (1170bp) protein (390aa)
LL-diaminopimelate aminotransferase apoenzyme (EC:2.6.1.83)
Marine sediment metagenome DNA, contig: S01H4_C00293 {ECO:0000313|EMBL:GAG69882.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
LL-diaminopimelate aminotransferase
MPI_scaffold_148_24

Not on your lists

comp(32042..32284)
DNA (243bp) protein (81aa)
Marine sediment metagenome DNA, contig: S12H4_L06037 {ECO:0000313|EMBL:GAI79436.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_148_25

Not on your lists

comp(32320..32763)
DNA (444bp) protein (148aa)
Marine sediment metagenome DNA, contig: S06H3_C00731 {ECO:0000313|EMBL:GAI01674.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_148_26

Not on your lists

comp(32855..32947)
DNA (93bp) protein (31aa)
Marine sediment metagenome DNA, contig: S06H3_S07993 {ECO:0000313|EMBL:GAI20957.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Displaying 26 items

View Taxonomy