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MPI_scaffold_470

Alias: MPI_Clostridia_34_121_11

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Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_470_1

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comp(175..1467)
DNA (1293bp) protein (431aa)
Marine sediment metagenome DNA, contig: S01H4_C00258 {ECO:0000313|EMBL:GAG69003.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
phosphodiesterase
Ribonuclease Y
MPI_scaffold_470_2

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comp(2143..2658)
DNA (516bp) protein (172aa)
Marine sediment metagenome DNA, contig: S01H1_S20056 {ECO:0000313|EMBL:GAG26455.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
regulatory protein RecX
regulatory protein RecX; K03565 regulatory protein alias=RBG1_1889,RBG1_C00001G01889 id=1251447 tax=RBG1 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
MPI_scaffold_470_3
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(2775..3818)
DNA (1044bp) protein (348aa)
recA protein; K03553 recombination protein RecA Tax=RBG_19FT_COMBO_JS1_35_14_curated
recA protein
Protein RecA
MPI_scaffold_470_4

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comp(3880..4452)
DNA (573bp) protein (191aa)
Marine sediment metagenome DNA, contig: S12H4_C01867 {ECO:0000313|EMBL:GAI64802.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
2'-5' RNA ligase
2'-5' RNA ligase
MPI_scaffold_470_5

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comp(4543..5070)
DNA (528bp) protein (176aa)
Marine sediment metagenome DNA, contig: S01H1_L03334 {ECO:0000313|EMBL:GAF69130.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
GTP-binding protein
Conserved hypothetical GTP-binding protein
MPI_scaffold_470_6

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comp(5208..6035)
DNA (828bp) protein (276aa)
Marine sediment metagenome DNA, contig: S01H4_C00920 {ECO:0000313|EMBL:GAG58836.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Uncharacterized protein
MPI_scaffold_470_7

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comp(6132..7076)
DNA (945bp) protein (315aa)
Marine sediment metagenome DNA, contig: S01H4_C00920 {ECO:0000313|EMBL:GAG58839.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
sugar ABC transporter permease
Sugar ABC transporter, permease protein
MPI_scaffold_470_8
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(7076..8200)
DNA (1125bp) protein (375aa)
ABC sugar transporter inner membrane subunit; K02057 simple sugar transport system permease protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
ABC sugar transporter inner membrane subunit
ABC sugar transporter, inner membrane subunit
MPI_scaffold_470_9
CG_OP9-01, Atribacteria, Bacteria

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comp(8220..9758)
DNA (1539bp) protein (513aa)
ABC transporter-like protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] Tax=CG_OP9-01
ABC transporter-like protein
ABC transporter related
MPI_scaffold_470_10
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(9852..10904)
DNA (1053bp) protein (351aa)
basic membrane protein family protein; K07335 basic membrane protein A and related proteins Tax=RBG_19FT_COMBO_JS1_35_14_curated
basic membrane protein family protein
Basic membrane protein family protein
MPI_scaffold_470_11
CG_OP9-01, Atribacteria, Bacteria

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comp(11651..13807)
DNA (2157bp) protein (719aa)
cell division protein FtsK/SpoIIIE; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=CG_OP9-01
ftsK; DNA translocase FtsK
Cell division protein FtsK/SpoIIIE
MPI_scaffold_470_12
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(13812..14639)
DNA (828bp) protein (276aa)
UDP-diphosphatase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=RBG_19FT_COMBO_JS1_35_14_curated
undecaprenyl-diphosphatase
Undecaprenyl-diphosphatase
MPI_scaffold_470_13
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(14648..16261)
DNA (1614bp) protein (538aa)
II-like Na/Pi co-transporter Tax=RBG_19FT_COMBO_JS1_35_14_curated
II-like Na/Pi co-transporter
II-like Na/Pi co-transporter
MPI_scaffold_470_14

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comp(16498..16965)
DNA (468bp) protein (156aa)
Marine sediment metagenome DNA, contig: S01H1_S05155 {ECO:0000313|EMBL:GAF96281.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase
MPI_scaffold_470_15
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(17017..19158)
DNA (2142bp) protein (714aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RBG_19FT_COMBO_JS1_35_14_curated
pnpA; polynucleotide phosphorylase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase
MPI_scaffold_470_16

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comp(19274..19543)
DNA (270bp) protein (90aa)
Marine sediment metagenome DNA, contig: S01H4_C00641 {ECO:0000313|EMBL:GAG73996.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
30S ribosomal protein S15
30S ribosomal protein S15
MPI_scaffold_470_17

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comp(19609..20154)
DNA (546bp) protein (182aa)
Marine sediment metagenome DNA, contig: S03H2_C02571 {ECO:0000313|EMBL:GAH29724.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Transposase IS4 family protein
Displaying 17 items

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