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MPI_scaffold_515

Alias: MPI_Clostridia_34_121_6

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_515_1
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

2..106
DNA (105bp) protein (35aa)
tuf2; elongation factor Tu 2 Tax=RBG_19FT_COMBO_JS1_35_14_curated
elongation factor Tu
Elongation factor Tu
MPI_scaffold_515_2
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


507..815
DNA (309bp) protein (103aa)
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RBG_19FT_COMBO_JS1_35_14_curated
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10
MPI_scaffold_515_3
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


1305..1928
DNA (624bp) protein (208aa)
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RBG_19FT_COMBO_JS1_35_14_curated
rplC; 50S ribosomal protein L3
50S ribosomal protein L3
MPI_scaffold_515_4
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


1965..2588
DNA (624bp) protein (208aa)
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RBG_19FT_COMBO_JS1_35_14_curated
rplD; 50S ribosomal protein L4
50S ribosomal protein L4
MPI_scaffold_515_5

Not on your lists


2585..2875
DNA (291bp) protein (97aa)
Marine sediment metagenome DNA, contig: S01H1_S29696 {ECO:0000313|EMBL:GAG36521.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rplW; 50S ribosomal protein L23
50S ribosomal protein L23
MPI_scaffold_515_6
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


2960..3745
DNA (786bp) protein (262aa)
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RBG_19FT_COMBO_JS1_35_14_curated
rplB; 50S ribosomal protein L2
50S ribosomal protein L2
MPI_scaffold_515_7
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


3771..4055
DNA (285bp) protein (95aa)
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 Tax=RBG_19FT_COMBO_JS1_35_14_curated
30S ribosomal protein S19
30S ribosomal protein S19
MPI_scaffold_515_8

Not on your lists


4207..4551
DNA (345bp) protein (115aa)
Marine sediment metagenome DNA, contig: S03H2_L01403 {ECO:0000313|EMBL:GAH47319.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rplV; 50S ribosomal protein L22
50S ribosomal protein L22
MPI_scaffold_515_9

Not on your lists


4552..5286
DNA (735bp) protein (245aa)
Marine sediment metagenome DNA, contig: S01H4_L07082 {ECO:0000313|EMBL:GAG85900.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
30S ribosomal protein S3
30S ribosomal protein S3
MPI_scaffold_515_10

Not on your lists


5270..5692
DNA (423bp) protein (141aa)
Marine sediment metagenome DNA, contig: S12H4_C03344 {ECO:0000313|EMBL:GAI66061.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
50S ribosomal protein L16
50S ribosomal protein L16
MPI_scaffold_515_11
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


5693..5899
DNA (207bp) protein (69aa)
ribosomal protein L29 Tax=RBG_19FT_COMBO_JS1_35_14_curated
ribosomal protein L29
50S ribosomal protein L29
MPI_scaffold_515_12

Not on your lists


5918..6175
DNA (258bp) protein (86aa)
Marine sediment metagenome DNA, contig: S12H4_C02099 {ECO:0000313|EMBL:GAI67435.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rpsQ; 30S ribosomal protein S17
SSU ribosomal protein S17p (S11e)
MPI_scaffold_515_13

Not on your lists


6356..6724
DNA (369bp) protein (123aa)
Marine sediment metagenome DNA, contig: S03H2_S08686 {ECO:0000313|EMBL:GAH57212.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
50S ribosomal protein L14
50S ribosomal protein L14
MPI_scaffold_515_14
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


6743..7075
DNA (333bp) protein (111aa)
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RBG_19FT_COMBO_JS1_35_14_curated
rplX; 50S ribosomal protein L24
50S ribosomal protein L24
MPI_scaffold_515_15
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


7087..7626
DNA (540bp) protein (180aa)
LSU ribosomal protein L5P Tax=RBG_19FT_COMBO_JS1_35_14_curated
LSU ribosomal protein L5P
50S ribosomal protein L5
MPI_scaffold_515_16
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


7708..7968
DNA (261bp) protein (87aa)
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14 Tax=RBG_19FT_COMBO_JS1_35_14_curated
30S ribosomal protein S14
30S ribosomal protein S14 type Z
MPI_scaffold_515_17

Not on your lists


8031..8429
DNA (399bp) protein (133aa)
Marine sediment metagenome DNA, contig: S01H4_C02616 {ECO:0000313|EMBL:GAG64993.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8
MPI_scaffold_515_18
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


8768..9307
DNA (540bp) protein (180aa)
rplF; ribosomal protein L6 (BL8) Tax=RBG_19FT_COMBO_JS1_35_14_curated
rplF; 50S ribosomal protein L6
UPI0001E2D4C2 related cluster
MPI_scaffold_515_19
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


9469..9843
DNA (375bp) protein (125aa)
rplR; 50S ribosomal protein L18; K02881 large subunit ribosomal protein L18 Tax=RBG_19FT_COMBO_JS1_35_14_curated
rplR; 50S ribosomal protein L18
50S ribosomal protein L18
MPI_scaffold_515_20

Not on your lists


9963..10505
DNA (543bp) protein (181aa)
Marine sediment metagenome DNA, contig: S01H4_C03851 {ECO:0000313|EMBL:GAG62503.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
30S ribosomal protein S5
30S ribosomal protein S5
MPI_scaffold_515_21

Not on your lists


10492..10932
DNA (441bp) protein (147aa)
Marine sediment metagenome DNA, contig: S03H2_S11725 {ECO:0000313|EMBL:GAH67452.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rplO; 50S ribosomal protein L15
50S ribosomal protein L15
MPI_scaffold_515_22
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


10933..12201
DNA (1269bp) protein (423aa)
protein translocase subunit secY/sec61 alpha Tax=RBG_19FT_COMBO_JS1_35_14_curated
protein translocase subunit secY/sec61 alpha
Protein translocase subunit SecY
MPI_scaffold_515_23

Not on your lists

12671..13321
DNA (651bp) protein (217aa)
Marine sediment metagenome DNA, contig: S03H2_C00486 {ECO:0000313|EMBL:GAH21234.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
adenylate kinase
Adenylate kinase
MPI_scaffold_515_24

Not on your lists

13326..14084
DNA (759bp) protein (253aa)
methionine aminopeptidase, type I (EC:3.4.11.18)
Marine sediment metagenome DNA, contig: S03H2_C00486 {ECO:0000313|EMBL:GAH21238.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Methionine aminopeptidase
MPI_scaffold_515_25

Not on your lists

14142..14357
DNA (216bp) protein (72aa)
Marine sediment metagenome DNA, contig: S03H2_S04131 {ECO:0000313|EMBL:GAH50443.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
translation initiation factor IF-1
Translation initiation factor IF-1
MPI_scaffold_515_26
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

14542..14658
DNA (117bp) protein (39aa)
rpmJ; Ribosomal protein L36; K02919 large subunit ribosomal protein L36 Tax=RBG_19FT_COMBO_JS1_35_14_curated
50S ribosomal protein L36
50S ribosomal protein L36
MPI_scaffold_515_27

Not on your lists


14683..15060
DNA (378bp) protein (126aa)
Marine sediment metagenome DNA, contig: S01H4_S14678 {ECO:0000313|EMBL:GAH10975.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
30S ribosomal protein S13
30S ribosomal protein S13
MPI_scaffold_515_28

Not on your lists


15089..15484
DNA (396bp) protein (132aa)
Marine sediment metagenome DNA, contig: S01H4_C02506 {ECO:0000313|EMBL:GAG63015.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
30S ribosomal protein S11
30S ribosomal protein S11
MPI_scaffold_515_29
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


15669..16301
DNA (633bp) protein (211aa)
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_19FT_COMBO_JS1_35_14_curated
30S ribosomal protein S4
30S ribosomal protein S4
MPI_scaffold_515_30
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

16347..17309
DNA (963bp) protein (321aa)
DNA-directed RNA polymerase, alpha subunit Tax=RBG_19FT_COMBO_JS1_35_14_curated
DNA-directed RNA polymerase, alpha subunit
DNA-directed RNA polymerase subunit alpha
Displaying items 1-30 of 39 in total

View Taxonomy