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MPI_scaffold_524

Alias: MPI_Clostridia_34_121_14

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_524_1

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comp(190..1365)
DNA (1176bp) protein (392aa)
Marine sediment metagenome DNA, contig: S12H4_C01377 {ECO:0000313|EMBL:GAI59442.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
pheromone shutdown-related protein TraB
Pheromone shutdown-related protein TraB
MPI_scaffold_524_2

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comp(1524..2147)
DNA (624bp) protein (208aa)
Marine sediment metagenome DNA, contig: S06H3_C04805 {ECO:0000313|EMBL:GAI07494.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
hypothetical protein alias=ACD58_C00002G00012,ACD58_7071.9074.10G0012,ACD58_7071.9074.10_12 id=86172 tax=ACD58 species=Caldicellulosiruptor saccharolyticus genus=Caldicellulosiruptor taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=ACD58 organism_desc=ACD58
MPI_scaffold_524_3
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(2477..3478)
DNA (1002bp) protein (334aa)
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] Tax=RBG_19FT_COMBO_JS1_35_14_curated
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase
MPI_scaffold_524_4
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(3475..4707)
DNA (1233bp) protein (411aa)
aspartate kinase (EC:2.7.2.4); K00928 aspartate kinase [EC:2.7.2.4] Tax=RBG_19FT_COMBO_JS1_35_14_curated
aspartate kinase (EC:2.7.2.4)
Aspartokinase
MPI_scaffold_524_5

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comp(5181..6098)
DNA (918bp) protein (306aa)
Marine sediment metagenome DNA, contig: S01H4_C00132 {ECO:0000313|EMBL:GAG65395.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
homoserine kinase
Homoserine kinase
MPI_scaffold_524_6
CG_OP9-01, Atribacteria, Bacteria

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comp(6111..7397)
DNA (1287bp) protein (429aa)
homoserine dehydrogenase (EC:1.1.1.3); K00003 homoserine dehydrogenase [EC:1.1.1.3] Tax=CG_OP9-01
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase
MPI_scaffold_524_7
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(7745..10300)
DNA (2556bp) protein (852aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RBG_19FT_COMBO_JS1_35_14_curated
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A
MPI_scaffold_524_8

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comp(10537..12486)
DNA (1950bp) protein (650aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3)
Marine sediment metagenome DNA, contig: S01H4_C00288 {ECO:0000313|EMBL:GAG69780.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
DNA gyrase subunit B
MPI_scaffold_524_9

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comp(12656..12973)
DNA (318bp) protein (106aa)
Marine sediment metagenome DNA, contig: S12H4_S00162 {ECO:0000313|EMBL:GAI77081.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_524_10
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(12970..14109)
DNA (1140bp) protein (380aa)
DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF Tax=RBG_19FT_COMBO_JS1_35_14_curated
DNA replication and repair protein RecF
DNA replication and repair protein RecF
MPI_scaffold_524_11

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comp(14179..15345)
DNA (1167bp) protein (389aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
Marine sediment metagenome DNA, contig: S06H3_C00796 {ECO:0000313|EMBL:GAI02127.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
DNA polymerase III subunit beta
MPI_scaffold_524_12
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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comp(15579..16940)
DNA (1362bp) protein (454aa)
chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroida
Chromosomal replication initiator protein DnaA
MPI_scaffold_524_13

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17424..17564
DNA (141bp) protein (47aa)
Marine sediment metagenome DNA, contig: S03H2_S18139 {ECO:0000313|EMBL:GAH65169.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
50S ribosomal protein L34
50S ribosomal protein L34
MPI_scaffold_524_14
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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18027..18266
DNA (240bp) protein (80aa)
hypothetical protein
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococ
Putative membrane protein insertion efficiency factor
MPI_scaffold_524_15
Synergistes sp. 3_1_syn1, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

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18355..18456
DNA (102bp) protein (34aa)
YidC/Oxa1 family membrane protein insertase
Displaying 15 items

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