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MPI_scaffold_540

Alias: MPI_Clostridia_34_121_12

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_540_1

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1..765
DNA (765bp) protein (255aa)
pyruvate formate-lyase (EC:2.3.1.54)
Marine sediment metagenome DNA, contig: S06H3_L02202 {ECO:0000313|EMBL:GAI14688.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Pyruvate formate-lyase
MPI_scaffold_540_2
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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1125..1400
DNA (276bp) protein (92aa)
GntR family transcriptional regulator Tax=RBG_13_Actinobacteria_35_12_curated
Transcriptional regulator, GntR family
UPI00023FA6F2 related cluster
MPI_scaffold_540_3
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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1382..1654
DNA (273bp) protein (91aa)
GntR family transcriptional regulator Tax=RBG_19FT_COMBO_JS1_35_14_curated
MPI_scaffold_540_4
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

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2034..3680
DNA (1647bp) protein (549aa)
ddpA; D,D-dipeptide ABC transporter substrate binding protein DdpA Tax=Caldatribacterium californiense
family 5 extracellular solute-binding protein
Extracellular solute-binding protein family 5
MPI_scaffold_540_5
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3833..4858
DNA (1026bp) protein (342aa)
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AEG60373.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomacu
Binding-protein-dependent transport systems inner membrane component
MPI_scaffold_540_6
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4860..5774
DNA (915bp) protein (305aa)
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABO50092.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomacu
Binding-protein-dependent transport systems inner membrane component
MPI_scaffold_540_7
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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5799..6779
DNA (981bp) protein (327aa)
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AEG60371.1}; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source=
Oligopeptide/dipeptide ABC transporter, ATPase subunit
MPI_scaffold_540_8

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6784..7770
DNA (987bp) protein (329aa)
Marine sediment metagenome DNA, contig: S01H1_L02198 {ECO:0000313|EMBL:GAF71825.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit
MPI_scaffold_540_9

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8542..8721
DNA (180bp) protein (60aa)
hydantoin racemase (EC:5.1.99.5)
Marine sediment metagenome DNA, contig: S12H4_L04437 {ECO:0000313|EMBL:GAI76006.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Hydantoin racemase
MPI_scaffold_540_10

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comp(8710..9408)
DNA (699bp) protein (233aa)
Marine sediment metagenome DNA, contig: S01H4_C00029 {ECO:0000313|EMBL:GAG61892.1}; Marine sediment metagenome DNA, contig: S01H4_C00583 {ECO:0000313|EMBL:GAG73651.1}; TaxID=412755 species="unclassifi
transposase
Transposase (Fragment)
MPI_scaffold_540_11

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10286..11068
DNA (783bp) protein (261aa)
Marine sediment metagenome DNA, contig: S03H2_C00117 {ECO:0000313|EMBL:GAH27381.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hydantoin racemase
Hydantoin racemase
MPI_scaffold_540_12
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11282..12382
DNA (1101bp) protein (367aa)
Xaa-Pro aminopeptidase
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:AET69412.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (st
Xaa-Pro aminopeptidase
MPI_scaffold_540_13
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12421..13785
DNA (1365bp) protein (455aa)
aminotransferase class-III
Aminotransferase class-III {ECO:0000313|EMBL:AKA67986.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
Aminotransferase class-III
MPI_scaffold_540_14
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

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14035..16092
DNA (2058bp) protein (686aa)
N-methylhydantoinase A/acetone carboxylase subunit beta rbh
N-methylhydantoinase A/acetone carboxylase, beta subunit {ECO:0000313|EMBL:AFM22527.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" sour
N-methylhydantoinase A/acetone carboxylase, beta subunit
MPI_scaffold_540_15
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

16096..17835
DNA (1740bp) protein (580aa)
N-methylhydantoinase B/acetone carboxylase subunit alpha
N-methylhydantoinase B/acetone carboxylase, alpha subunit {ECO:0000313|EMBL:AFM22526.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" sou
N-methylhydantoinase B/acetone carboxylase, alpha subunit
MPI_scaffold_540_16
Ilyobacter polytropus, Ilyobacter, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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17973..18302
DNA (330bp) protein (110aa)
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ADO82006.1}; TaxID=572544 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Ilyobacter.;" source="Ilyobacter polytropus (stra
Transcriptional regulator, MerR family
MPI_scaffold_540_17

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18574..18954
DNA (381bp) protein (127aa)
Marine sediment metagenome DNA, contig: S12H4_L03218 {ECO:0000313|EMBL:GAI77424.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
proline racemase
Proline racemase
MPI_scaffold_540_18
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18929..19591
DNA (663bp) protein (221aa)
Proline racemase A {ECO:0000313|EMBL:EQK44869.1}; EC=5.1.1.4 {ECO:0000313|EMBL:EQK44869.1};; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostri
proline racemase (EC:5.1.1.4)
Proline racemase
MPI_scaffold_540_19

Not on your lists

19606..19722
DNA (117bp) protein (39aa)
Marine sediment metagenome DNA, contig: S01H4_S18937 {ECO:0000313|EMBL:GAH14139.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Sarcosine oxidase, alpha subunit
Displaying 19 items

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