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MPI_scaffold_577

Alias: MPI_Clostridia_34_121_15

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_577_1

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231..818
DNA (588bp) protein (196aa)
Marine sediment metagenome DNA, contig: S03H2_C02261 {ECO:0000313|EMBL:GAH25978.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
thioesterase superfamily protein
Transcription factor fapR
MPI_scaffold_577_2
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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819..1796
DNA (978bp) protein (326aa)
phosphate:acyl-(acyl carrier protein) acyltransferase Tax=RBG_19FT_COMBO_JS1_35_14_curated
fatty acid/phospholipid synthesis protein PlsX
Phosphate acyltransferase
MPI_scaffold_577_3
CG_OP9-01, Atribacteria, Bacteria

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1837..2829
DNA (993bp) protein (331aa)
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=CG_OP9-01
FabH3; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3
MPI_scaffold_577_4
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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2882..3832
DNA (951bp) protein (317aa)
malonyl CoA-ACP transacylase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] Tax=RBG_19FT_COMBO_JS1_35_14_curated
FabD; (acyl-carrier-protein) S-malonyltransferase
Malonyl CoA-acyl carrier protein transacylase
MPI_scaffold_577_5

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3834..4580
DNA (747bp) protein (249aa)
Marine sediment metagenome DNA, contig: S01H4_C01279 {ECO:0000313|EMBL:GAG65898.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
3-oxoacyl-(acyl-carrier-protein) reductase
3-oxoacyl-(Acyl-carrier-protein) reductase
MPI_scaffold_577_6

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4600..4824
DNA (225bp) protein (75aa)
Marine sediment metagenome DNA, contig: S01H1_L06663 {ECO:0000313|EMBL:GAF79509.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
acyl carrier protein
Acyl carrier protein
MPI_scaffold_577_7
CG_OP9-01, Atribacteria, Bacteria

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4990..6231
DNA (1242bp) protein (414aa)
3-oxoacyl-(acyl-carrier-protein) synthase 2; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] Tax=CG_OP9-01
3-oxoacyl-(acyl-carrier-protein) synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2
MPI_scaffold_577_8
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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6941..7630
DNA (690bp) protein (230aa)
RNAse III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=RBG_19FT_COMBO_JS1_35_14_curated
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3
MPI_scaffold_577_9
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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7627..11208
DNA (3582bp) protein (1194aa)
chromosome segregation protein SMC; K03529 chromosome segregation protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
smc; chromosome segregation protein Smc
Chromosome partition protein Smc
MPI_scaffold_577_10

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11231..12151
DNA (921bp) protein (307aa)
Marine sediment metagenome DNA, contig: S01H1_C00164 {ECO:0000313|EMBL:GAF72956.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY
MPI_scaffold_577_11
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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12245..13567
DNA (1323bp) protein (441aa)
signal recognition particle protein; K03106 signal recognition particle subunit SRP54 Tax=RBG_19FT_COMBO_JS1_35_14_curated
signal recognition particle protein
Signal recognition particle protein
MPI_scaffold_577_12

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13676..14029
DNA (354bp) protein (118aa)
Marine sediment metagenome DNA, contig: S01H4_C02376 {ECO:0000313|EMBL:GAG60624.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
30S ribosomal protein S16
30S ribosomal protein S16
MPI_scaffold_577_13

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14048..14278
DNA (231bp) protein (77aa)
Marine sediment metagenome DNA, contig: S01H4_C02376 {ECO:0000313|EMBL:GAG60619.1}; Marine sediment metagenome DNA, contig: S01H4_C05370 {ECO:0000313|EMBL:GAG64988.1}; TaxID=412755 species="unclassifi
nucleic acid binding protein, containing KH domain
UPF0109 protein CLJU_c12900
MPI_scaffold_577_14
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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14474..14965
DNA (492bp) protein (164aa)
16S rRNA processing protein rimm; K02860 16S rRNA processing protein RimM Tax=RBG_19FT_COMBO_JS1_35_14_curated
16S rRNA-processing protein RimM
Ribosome maturation factor RimM
MPI_scaffold_577_15
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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14962..15723
DNA (762bp) protein (254aa)
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=RBG_19FT_COMBO_JS1_35_14_curated
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase
MPI_scaffold_577_16
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


15825..16169
DNA (345bp) protein (115aa)
hypothetical protein; K02884 large subunit ribosomal protein L19 Tax=RBG_19FT_COMBO_JS1_35_14_curated
hypothetical protein
50S ribosomal protein L19
MPI_scaffold_577_17
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

16174..16884
DNA (711bp) protein (237aa)
rnhB; ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4] Tax=RBG_19FT_COMBO_JS1_35_14_curated
ribonuclease H (EC:3.1.26.4)
Ribonuclease HII
MPI_scaffold_577_18

Not on your lists

16877..17257
DNA (381bp) protein (127aa)
Marine sediment metagenome DNA, contig: S03H2_S22570 {ECO:0000313|EMBL:GAH89399.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
UPF0102 protein yraN
UPF0102 protein HMPREF9429_00680
Displaying 18 items

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