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MPI_scaffold_993

Alias: MPI_Clostridia_34_121_9

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_993_1

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435..1115
DNA (681bp) protein (227aa)
Marine sediment metagenome DNA, contig: S01H1_C00082 {ECO:0000313|EMBL:GAF71503.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
biopolymer transport membrane proton channel TolQ-like protein
Biopolymer transport membrane proton channel, TolQ-related protein
MPI_scaffold_993_2

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1093..1503
DNA (411bp) protein (137aa)
Marine sediment metagenome DNA, contig: S01H1_C00082 {ECO:0000313|EMBL:GAF71507.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR
MPI_scaffold_993_3

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1999..3372
DNA (1374bp) protein (458aa)
Marine sediment metagenome DNA, contig: S01H4_C00452 {ECO:0000313|EMBL:GAG72539.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Uncharacterized protein
MPI_scaffold_993_4
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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3376..4347
DNA (972bp) protein (324aa)
XerD; site-specific recombinase XerD; K04763 integrase/recombinase XerD Tax=RBG_19FT_COMBO_JS1_35_14_curated
ripX; site-specific tyrosine recombinase for chromosome partitioning
Tyrosine recombinase XerD
MPI_scaffold_993_5

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4716..5540
DNA (825bp) protein (275aa)
Marine sediment metagenome DNA, contig: S01H1_C00152 {ECO:0000313|EMBL:GAF72742.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
purine nucleoside phosphorylase
Purine nucleoside phosphorylase
MPI_scaffold_993_6

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5533..5991
DNA (459bp) protein (153aa)
Marine sediment metagenome DNA, contig: S03H2_S12280 {ECO:0000313|EMBL:GAH73791.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Small multidrug export protein
Putative small multi-drug export protein
MPI_scaffold_993_7
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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6269..7297
DNA (1029bp) protein (343aa)
translation initiation factor 2B subunit; K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23] Tax=RBG_19FT_COMBO_JS1_35_14_curated
mtnA; methylthioribose-1-phosphate isomerase
Methylthioribose-1-phosphate isomerase
MPI_scaffold_993_8
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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7417..8679
DNA (1263bp) protein (421aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RBG_19FT_COMBO_JS1_35_14_curated
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
MPI_scaffold_993_9

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8837..9853
DNA (1017bp) protein (339aa)
Marine sediment metagenome DNA, contig: S01H1_L04325 {ECO:0000313|EMBL:GAF83775.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rod shape-determining protein MreB
Cell shape determining protein, MreB/Mrl family
MPI_scaffold_993_10

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10019..11857
DNA (1839bp) protein (613aa)
Marine sediment metagenome DNA, contig: S01H1_C00119 {ECO:0000313|EMBL:GAF72176.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
SpoIVB peptidase S55
SpoIVB peptidase S55
MPI_scaffold_993_11
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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12301..12705
DNA (405bp) protein (135aa)
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60) Tax=RBG_19FT_COMBO_JS1_35_14_curated
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:2.7.7.60 4.6.1.12)
Bifunctional enzyme IspD/IspF
MPI_scaffold_993_12

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12702..13559
DNA (858bp) protein (286aa)
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
Marine sediment metagenome DNA, contig: S03H2_C02940 {ECO:0000313|EMBL:GAH19302.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
MPI_scaffold_993_13

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13784..14263
DNA (480bp) protein (160aa)
Marine sediment metagenome DNA, contig: S01H4_C00649 {ECO:0000313|EMBL:GAG74043.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
MPI_scaffold_993_14

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14548..14943
DNA (396bp) protein (132aa)
Marine sediment metagenome DNA, contig: S03H2_S04236 {ECO:0000313|EMBL:GAH51696.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Domain of unknown function (DUF1844)
hypothetical protein alias=RBG1_404,RBG1_C00001G00404 id=1249962 tax=RBG1 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria
MPI_scaffold_993_15

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14988..15971
DNA (984bp) protein (328aa)
Marine sediment metagenome DNA, contig: S01H1_C00986 {ECO:0000313|EMBL:GAF84745.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Uncharacterized protein
MPI_scaffold_993_16
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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16179..16751
DNA (573bp) protein (191aa)
nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RBG_19FT_COMBO_JS1_35_14_curated
nicotinate-nucleotide adenylyltransferase
Probable nicotinate-nucleotide adenylyltransferase
MPI_scaffold_993_17
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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16822..17394
DNA (573bp) protein (191aa)
HD superfamily hydrolase Tax=RBG_19FT_COMBO_JS1_35_14_curated
HD superfamily hydrolase
Predicted HD superfamily hydrolase involved in NAD metabolism
MPI_scaffold_993_18

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17394..18578
DNA (1185bp) protein (395aa)
Marine sediment metagenome DNA, contig: S01H4_C01352 {ECO:0000313|EMBL:GAG67299.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
cell envelope-related transcriptional attenuator
Cell envelope-related transcriptional attenuator
MPI_scaffold_993_19

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18898..19284
DNA (387bp) protein (129aa)
Marine sediment metagenome DNA, contig: S01H4_C00021 {ECO:0000313|EMBL:GAG61552.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
iojap family protein
Ribosomal silencing factor RsfS
MPI_scaffold_993_20
CG_OP9-01, Atribacteria, Bacteria

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19281..19652
DNA (372bp) protein (124aa)
hypothetical protein Tax=CG_OP9-01
MPI_scaffold_993_21
CG_OP9-01, Atribacteria, Bacteria

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comp(19653..20711)
DNA (1059bp) protein (353aa)
hypothetical protein Tax=CG_OP9-01
hypothetical protein
Uncharacterized protein
MPI_scaffold_993_22

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20962..21642
DNA (681bp) protein (227aa)
Marine sediment metagenome DNA, contig: S01H4_C00615 {ECO:0000313|EMBL:GAG73840.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Uncharacterized membrane protein, possible Na+ channel or pump
Displaying 22 items

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