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MPI_scaffold_364

Alias: MPI_Desulfotomaculum_46_185_33

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_364_1
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

224..478
DNA (255bp) protein (85aa)
AbrB; regulators of stationary/sporulation gene expression
AbrB family transcriptional regulator {ECO:0000313|EMBL:KJS12184.1}; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.
Regulators of stationary/sporulation gene expression
MPI_scaffold_364_2
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(537..1433)
DNA (897bp) protein (299aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I
Ribosomal RNA small subunit methyltransferase I
MPI_scaffold_364_3
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1433..1738)
DNA (306bp) protein (102aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG13689.1}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (
Putative uncharacterized protein
MPI_scaffold_364_4
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1692..2558)
DNA (867bp) protein (289aa)
hypothetical protein
Uncharacterized homolog of PSP1 {ECO:0000313|EMBL:BAF58245.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropi
Uncharacterized homolog of PSP1
MPI_scaffold_364_5
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2582..3628)
DNA (1047bp) protein (349aa)
DnaX; DNA polymerase III, gamma/tau subunits
DNA polymerase III, gamma/tau subunits {ECO:0000313|EMBL:BAF58244.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum ther
DNA polymerase III, gamma/tau subunits
MPI_scaffold_364_6
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3612..4253)
DNA (642bp) protein (214aa)
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=760568 species="Bacteria; Firmicutes; Clostrid
Thymidylate kinase
MPI_scaffold_364_7
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4256..5704)
DNA (1449bp) protein (483aa)
arginine decarboxylase (EC:4.1.1.19) rbh
Arginine decarboxylase {ECO:0000313|EMBL:AEG13685.1}; EC=4.1.1.19 {ECO:0000313|EMBL:AEG13685.1};; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculu
Arginine decarboxylase
MPI_scaffold_364_8
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5949..6497
DNA (549bp) protein (183aa)
2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family Tax=RBG_16_Deltaproteobacteria_48_10_curated
pyruvate/ketoisovalerate oxidoreductase subunit gamma
Pyruvate ferredoxin oxidoreductase, gamma subunit
MPI_scaffold_364_9
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

Not on your lists

6511..6804
DNA (294bp) protein (98aa)
pyruvate ferredoxin/flavodoxin oxidoreductase subunit delta; K00171 pyruvate ferredoxin oxidoreductase, delta subunit [EC:1.2.7.1] Tax=RBG_13_Chloroflexi_52_14_curated
pyruvic-ferredoxin oxidoreductase subunit delta
Pyruvate ferredoxin oxidoreductase, delta subunit
MPI_scaffold_364_10
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6804..7982
DNA (1179bp) protein (393aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K00169 pyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.1] Tax=RBG_16_Deltaproteobacteria_48_10_curated
2-oxoacid:ferredoxin oxidoreductase, alpha subunit
2-oxoacid:ferredoxin oxidoreductase, alpha subunit
MPI_scaffold_364_11
RBG_19FT_COMBO_Syntrophobacterales_59_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8014..8505
DNA (492bp) protein (164aa)
bamG; benzoyl-CoA reductase electron transfer protein; K00334 NADH-quinone oxidoreductase subunit E [EC:1.6.5.3] Tax=RBG_19FT_COMBO_Syntrophobacterales_59_10_curated
hydrogenase
NADH dehydrogenase (Ubiquinone) 24 kDa subunit
MPI_scaffold_364_12
CG_Elusi_03, Elusimicrobia, Bacteria

Not on your lists

8495..10345
DNA (1851bp) protein (617aa)
HymB-like protein Tax=CG_Elusi_03
NADH dehydrogenase
[Fe] hydrogenase, HymB subunit
MPI_scaffold_364_13
RBG_13_Chloroflexi_51_18_curated, Chloroflexi, Bacteria

Not on your lists

10358..11071
DNA (714bp) protein (238aa)
hymC2; [Fe] hydrogenase subunit HymC Tax=RBG_13_Chloroflexi_51_18_curated
ferredoxin
Ferredoxin
MPI_scaffold_364_14
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11105..12028
DNA (924bp) protein (308aa)
pyruvate:ferredoxin oxidoreductase subunit beta; K00170 pyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.1] Tax=RBG_13_Deltaproteobacteria_52_11b_curated
pyruvate:ferredoxin oxidoreductase subunit beta
Pyruvate oxidoreductase, beta chain
MPI_scaffold_364_15
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12276..13610
DNA (1335bp) protein (445aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
trigger factor Tig
Trigger factor
MPI_scaffold_364_16
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13684..14268
DNA (585bp) protein (195aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit
MPI_scaffold_364_17
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14311..15564
DNA (1254bp) protein (418aa)
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococca
ATP-dependent Clp protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX
MPI_scaffold_364_18
RLO_PLX_64_10, Bacteria

Not on your lists

comp(15679..16467)
DNA (789bp) protein (263aa)
WD-40-like beta propeller repeat-containing protein; K03641 TolB protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
putative exported chitinase
Uncharacterized protein
MPI_scaffold_364_19
unknown

Not on your lists

comp(16823..16939)
DNA (117bp) protein (39aa)
MPI_scaffold_364_20
Paenibacillus terrae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17636..17947
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:KJD45528.1}; TaxID=159743 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus terrae.;"
hypothetical protein
Uncharacterized protein
MPI_scaffold_364_21

Not on your lists

18266..18793
DNA (528bp) protein (176aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL48035.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Retron-type reverse transcriptase
Group II intron, maturase-specific domain protein
MPI_scaffold_364_22
unknown

Not on your lists

18905..19078
DNA (174bp) protein (58aa)
MPI_scaffold_364_23
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19312..19440
DNA (129bp) protein (43aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=14875
Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain-containing protein
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit
MPI_scaffold_364_24
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19469..21643
DNA (2175bp) protein (725aa)
CoA-binding protein {ECO:0000313|EMBL:KJS13107.1}; TaxID=1629715 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c8a.;"
acyl-CoA synthetase (NDP forming)
CoA-binding domain protein
MPI_scaffold_364_25
unknown

Not on your lists

comp(21937..22140)
DNA (204bp) protein (68aa)
MPI_scaffold_364_26
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22567..22812
DNA (246bp) protein (82aa)
hypothetical protein
YcfA family protein {ECO:0000313|EMBL:AEG16035.1}; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (stra
YcfA family protein
MPI_scaffold_364_27
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22805..22939
DNA (135bp) protein (45aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV64570.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (
Putative uncharacterized protein
Displaying 27 items

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