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MPI_scaffold_589

Alias: MPI_Methanocalculus_52_21_15

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_589_1
unknown

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comp(414..521)
DNA (108bp) protein (36aa)
this scaffold carries 16S rRNA gene 99% to Methanocalculus halotolerans Jill Banfield (1/28/14)
MPI_scaffold_589_2
Methanoregula boonei, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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1726..2190
DNA (465bp) protein (155aa)
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABS55077.1}; TaxID=456442 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanore
GCN5-related N-acetyltransferase
MPI_scaffold_589_3
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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2174..3097
DNA (924bp) protein (308aa)
Uncharacterized conserved protein UCP018688 {ECO:0000313|EMBL:EJG07096.1}; TaxID=28892 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanofollis.;" sourc
hypothetical protein
Uncharacterized conserved protein UCP018688
MPI_scaffold_589_4
Methanocorpusculum labreanum, Methanocorpusculum, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3145..4725)
DNA (1581bp) protein (527aa)
hypothetical protein
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ABN06547.1}; TaxID=410358 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanocorpusculaceae; Methanocorpusculum.;" sou
DEAD/DEAH box helicase domain protein
MPI_scaffold_589_5
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4838..6088)
DNA (1251bp) protein (417aa)
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EJG07013.1}; TaxID=28892 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanofollis.;" source="Metha
major facilitator superfamily protein
Major facilitator superfamily MFS_1
MPI_scaffold_589_6
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6130..8022)
DNA (1893bp) protein (631aa)
Acetate/CoA ligase {ECO:0000313|EMBL:EJG07012.1}; TaxID=28892 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanofollis.;" source="Methanofollis liminata
acetate--CoA ligase
Acetate/CoA ligase
MPI_scaffold_589_7
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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8185..9585
DNA (1401bp) protein (467aa)
PAS sensor protein {ECO:0000313|EMBL:EHQ36083.1}; TaxID=937775 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Methanoplanus limicol
PAS/PAC sensor protein
PAS sensor protein
MPI_scaffold_589_8
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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9658..10467
DNA (810bp) protein (270aa)
UspA domain-containing protein
UspA domain protein {ECO:0000313|EMBL:ABN56096.1}; Flags: Precursor;; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="
UspA domain protein
MPI_scaffold_589_9
Methanoculleus sp. MH98A, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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10480..11988
DNA (1509bp) protein (503aa)
Glycine/betaine ABC transporter permease {ECO:0000313|EMBL:KDE55690.1}; TaxID=1495314 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" sourc
choline/carnitine/betaine transporter
Choline/carnitine/betaine transporter
MPI_scaffold_589_10
BJP_S1_SUB10_Methanoculleus_61_9, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(12009..16127)
DNA (4119bp) protein (1373aa)
heat repeat-containing PBS lyase
Heat repeat-containing PBS lyase
Tax=BJP_S1_SUB10_Methanoculleus_61_9
MPI_scaffold_589_11

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16352..17695
DNA (1344bp) protein (448aa)
FOG TPR repeat {ECO:0000313|EMBL:AAU82999.1}; TaxID=286721 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos1D1.;"
Transposase
FOG TPR repeat
MPI_scaffold_589_12
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(17758..17973)
DNA (216bp) protein (72aa)
putative GntR family transcriptional regulator
Transcriptional regulator with HTH domain and aminotransferase domain containing protein {ECO:0000313|EMBL:EMG37080.1}; TaxID=1262666 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovib
Transcriptional regulator with HTH domain and aminotransferase domain containing protein
MPI_scaffold_589_13
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(18058..18651)
DNA (594bp) protein (198aa)
EmrB/QacA family drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ABN56843.1}; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;
Drug resistance transporter, EmrB/QacA subfamily
Displaying 13 items

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