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MPI_scaffold_272_12

Organism: MPI_Nov_34_27_partial

partial RP 3 / 55 BSCG 3 / 51 ASCG 3 / 38
Location: comp(8271..10226)

Top 3 Functional Annotations

Value Algorithm Source
type II and III secretion system protein Tax=RBG_19FT_COMBO_Actinobacteria_36_27_curated UNIPROT
DB: UniProtKB
  • Identity: 63.1
  • Coverage: 396.0
  • Bit_score: 473
  • Evalue 3.60e-130
pilus assembly protein PilQ KEGG
DB: KEGG
  • Identity: 26.8
  • Coverage: 504.0
  • Bit_score: 171
  • Evalue 7.70e-40
Type IV pilus secretin PilQ similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 167
  • Evalue 1.60e-38

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_36_27_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1956
ATGAATAATAAAAAAGCACGATGTAAAAAAATAGATTCCCGTTTTTATGTAGTAGCTCTTCCTTTGTCATTGCGAGAGAACAAAGCAACCGAAGCAATCTCAAAAAGCAAGTTTTTTTCTAAACCAAGTAGAAAAATAAGTTTATTATTTATTATATTGATTTTATTTTTAATATCCTCGTTTTTGGCAAGTGCAAGTTCTCAAAGCATAAATATGACCAATATCTGGTACAAAAAACTACCCAATTATACCCACATTACTATTAAAGCAAGTGGAGCTATTTCAGAATATAATGTCTTTTATTTAGATGAGCCAGATAGAATAGTAATTGATGTTAAGAATGCATTTTATAACATTGAAGAATTAGTCAAGAATATTTTATTTTTAAATATGGGTTCGGTAAAACAGGTGCGGTGTGGACAATTTGAAAGTGAGCCAATCCCCATTACCAGATTTGTAGTAGATTTATTTCAGAAATCCGATTACGAAGTAAAATTATCTTCTGACAGAAGACTACTTTATGTCGATGTATATGATTATACTGAATTCAAAGCACCTGAAGAGCAAGTCTTTACAGTTACGCCAGTGAAAAGTGAAGCAGTAAAAATTGAAAAGGAAGAAGTAAAAAAATCAATAGTTGATACTGTTACCAAAACAATTAATCTGAACCTTAAAGAGGCAGAAGTGGTGGATGCCATAAGAGCATTATCAGAAATTAGCGGAATTGATATTGTAGTCGATGATTCGGTAGAAGGAAAAATAACTTTAAATTTAAAAGACAAATCTTTTAAAGATTCACTGGATTTAATCACTAAACTAAAAGGTTTAGATTATACCGAAGTCACTGGCACCTTGATAATCGCTAAAAAGGATGTAATAGAAAGTTATAAAAAACCTATTACTAAAATATTTGAATTGAAAAATGCTTCCGCAGACGAGGCAAAAGGAATATTAGATAATTATATAAAAGAAGGACTAAAGGGAAGTATTAACATCGTGGCTGATAGCAGATTAAATACTCTTATTGTAACTGGAGGAGAAGAGGAAATAGAAATAGTTAAAAATTTGATTACCACCATAGATGAAGAACTATCTACCGAAACTTTTAAAATAGATAATGCTATAGATGAAGAGGATATAAAAGCAATTCAAAATATGTTATCTATAATTATTCCTGATGCTGAAAATAGGATAAAAATTGATGATAGACAAAGAGAAATTATTGTAAAAGGTACTAAGGAAGAAATAAAAAAAGTAGAAGGTTTAATTCCGAAATTAGATAAAAGAGCCACTCAAATGGCTATAGAAATTAAGTTCGTGGAAATTTCCTTAAATGATTCGAAAGAGTTAGGAATCAAATGGACAAGTGGTGGGGAAGAAGGACAAATTGGTATTGGAGAACTAACCTTAGGAGGACCCTTAGAGAGATATGATAAAATTGAAGCACAAATAAAAGCTCTACAAACAAAAAATAAACTAAATATGATATCAAATCCAATAGTATATACTTCTAATGGGAAAAAGGCTTTTATTCATTCGGGTTCCAGAGTTCCATATGAAGAAGAAACTCCTGAGGGTGGCAAGAAAATAAATTGGGAAGATGTTGGAATAAGTATGACTATTACTCCTTGGATAAGATCTGATGGTCTTATTACTATGTTTATAAGAGCGGATAAAAGTTATTTAGGAGCAGTAAAAGTAAGAGACCTCCCAGTTATAGAAACTCAAGAAATAGGATACAAAGAAGAACAAAAACCTGCTTTGATTATTAGTGCTTATCCCGAAGAAACAAAAGTAATAGGTGGTTTAATTGAATCAAAGGAGGGAGAAATTATAGTTAAGATTCCTATATTAGGAGACATTCCAGTAATCGGTAAATTATTTCAAAGAACAAACAAAATGCAAGAGAAAACAGAATTAATTATCCTGATTACTCCCCATATATTAGATTACTAA
PROTEIN sequence
Length: 652
MNNKKARCKKIDSRFYVVALPLSLRENKATEAISKSKFFSKPSRKISLLFIILILFLISSFLASASSQSINMTNIWYKKLPNYTHITIKASGAISEYNVFYLDEPDRIVIDVKNAFYNIEELVKNILFLNMGSVKQVRCGQFESEPIPITRFVVDLFQKSDYEVKLSSDRRLLYVDVYDYTEFKAPEEQVFTVTPVKSEAVKIEKEEVKKSIVDTVTKTINLNLKEAEVVDAIRALSEISGIDIVVDDSVEGKITLNLKDKSFKDSLDLITKLKGLDYTEVTGTLIIAKKDVIESYKKPITKIFELKNASADEAKGILDNYIKEGLKGSINIVADSRLNTLIVTGGEEEIEIVKNLITTIDEELSTETFKIDNAIDEEDIKAIQNMLSIIIPDAENRIKIDDRQREIIVKGTKEEIKKVEGLIPKLDKRATQMAIEIKFVEISLNDSKELGIKWTSGGEEGQIGIGELTLGGPLERYDKIEAQIKALQTKNKLNMISNPIVYTSNGKKAFIHSGSRVPYEEETPEGGKKINWEDVGISMTITPWIRSDGLITMFIRADKSYLGAVKVRDLPVIETQEIGYKEEQKPALIISAYPEETKVIGGLIESKEGEIIVKIPILGDIPVIGKLFQRTNKMQEKTELIILITPHILDY*