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MPI_scaffold_272

Alias: MPI_Clostridia_34_121_90

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_272_1

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comp(1..108)
DNA (108bp) protein (36aa)
Marine sediment metagenome DNA, contig: S12H4_L00354 {ECO:0000313|EMBL:GAI87820.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
elongation factor P
Elongation factor P
MPI_scaffold_272_2

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comp(243..1481)
DNA (1239bp) protein (413aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
Marine sediment metagenome DNA, contig: S01H4_C01751 {ECO:0000313|EMBL:GAG72963.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Serine hydroxymethyltransferase
MPI_scaffold_272_3

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comp(1866..2948)
DNA (1083bp) protein (361aa)
Marine sediment metagenome DNA, contig: S01H4_C00168 {ECO:0000313|EMBL:GAG66435.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
peptidase M24
Aminopeptidase YpdF (MP-, MA-, MS-, AP-, NP-specific)
MPI_scaffold_272_4

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comp(3020..4363)
DNA (1344bp) protein (448aa)
Marine sediment metagenome DNA, contig: S01H4_C00168 {ECO:0000313|EMBL:GAG66424.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
ribosomal protein S12 methylthiotransferase RimO
Ribosomal protein S12 methylthiotransferase RimO
MPI_scaffold_272_5

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comp(4758..5072)
DNA (315bp) protein (105aa)
Marine sediment metagenome DNA, contig: S01H1_S23998 {ECO:0000313|EMBL:GAG14049.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
excinuclease ABC C subunit domain-containing protein
Endonuclease
MPI_scaffold_272_6
unknown

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comp(5072..5185)
DNA (114bp) protein (38aa)
MPI_scaffold_272_7

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comp(5248..5592)
DNA (345bp) protein (115aa)
Marine sediment metagenome DNA, contig: S01H4_S14110 {ECO:0000313|EMBL:GAG98815.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Uncharacterized conserved protein
MPI_scaffold_272_8

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comp(5967..6368)
DNA (402bp) protein (134aa)
Marine sediment metagenome DNA, contig: S06H3_S25390 {ECO:0000313|EMBL:GAI49045.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
putative transmembrane sensor domain protein
sti:Sthe_0598 adenylate/guanylate cyclase with TPR repeats alias=RBG9_45_85,RBG9_C00045G00085 id=1246164 tax=RBG9 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi
MPI_scaffold_272_9
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(6486..6836)
DNA (351bp) protein (117aa)
PemK-like protein Tax=CG_OP9-01
PemK-like protein
mRNA interferase
MPI_scaffold_272_10

Not on your lists

comp(6838..7065)
DNA (228bp) protein (76aa)
Marine sediment metagenome DNA, contig: S01H1_S16478 {ECO:0000313|EMBL:GAG16114.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Uncharacterized protein
MPI_scaffold_272_11
RBG_19FT_COMBO_Actinobacteria_36_27_curated, Actinobacteria, Bacteria

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comp(7268..8107)
DNA (840bp) protein (280aa)
PKD domain-containing protein Tax=RBG_19FT_COMBO_Actinobacteria_36_27_curated
MPI_scaffold_272_12
RBG_19FT_COMBO_Actinobacteria_36_27_curated, Actinobacteria, Bacteria

Not on your lists

comp(8271..10226)
DNA (1956bp) protein (652aa)
type II and III secretion system protein Tax=RBG_19FT_COMBO_Actinobacteria_36_27_curated
pilus assembly protein PilQ
Type IV pilus secretin PilQ
MPI_scaffold_272_13

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comp(10219..10875)
DNA (657bp) protein (219aa)
Marine sediment metagenome DNA, contig: S03H2_S14652 {ECO:0000313|EMBL:GAH70692.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
MPI_scaffold_272_14

Not on your lists

comp(10879..11433)
DNA (555bp) protein (185aa)
Marine sediment metagenome DNA, contig: S03H2_C01805 {ECO:0000313|EMBL:GAH20930.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
pilus assembly protein, PilO
Pilus assembly protein, PilO
MPI_scaffold_272_15

Not on your lists

comp(11460..12023)
DNA (564bp) protein (188aa)
Marine sediment metagenome DNA, contig: S01H4_L08034 {ECO:0000313|EMBL:GAG81079.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
fimbrial assembly family protein
Fimbrial assembly family protein
MPI_scaffold_272_16

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comp(12032..13099)
DNA (1068bp) protein (356aa)
Marine sediment metagenome DNA, contig: S01H4_C00046 {ECO:0000313|EMBL:GAG62513.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
pilus assembly protein PilM
Type IV pilus biogenesis ATPase PilM
MPI_scaffold_272_17

Not on your lists

comp(13337..14530)
DNA (1194bp) protein (398aa)
Marine sediment metagenome DNA, contig: S01H4_C00046 {ECO:0000313|EMBL:GAG62511.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Tfp pilus assembly protein PilX-like protein
MPI_scaffold_272_18

Not on your lists

comp(14636..15118)
DNA (483bp) protein (161aa)
Marine sediment metagenome DNA, contig: S03H2_S00140 {ECO:0000313|EMBL:GAH50053.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Prepilin peptidase domain protein
MPI_scaffold_272_19

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comp(15191..17599)
DNA (2409bp) protein (803aa)
Marine sediment metagenome DNA, contig: S01H4_C00046 {ECO:0000313|EMBL:GAG62500.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
MPI_scaffold_272_20

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comp(17660..18019)
DNA (360bp) protein (120aa)
Marine sediment metagenome DNA, contig: S01H4_C00641 {ECO:0000313|EMBL:GAG73994.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_272_21
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(18073..18558)
DNA (486bp) protein (162aa)
hypothetical protein Tax=CG_OP9-01
pilin assembly protein
Uncharacterized protein
MPI_scaffold_272_22

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comp(18813..19580)
DNA (768bp) protein (256aa)
Marine sediment metagenome DNA, contig: S03H2_C01749 {ECO:0000313|EMBL:GAH20399.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
peptidase A24A domain-containing protein
Type 4 prepilin-like proteins leader peptide-processing enzyme
MPI_scaffold_272_23

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comp(19595..19987)
DNA (393bp) protein (131aa)
Marine sediment metagenome DNA, contig: S01H4_S21668 {ECO:0000313|EMBL:GAH14633.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
MPI_scaffold_272_24
CG_Elusi_05, Elusimicrobia, Bacteria

Not on your lists

comp(20008..20265)
DNA (258bp) protein (86aa)
Addiction module toxin, RelE/StbE
Tax=CG_Elusi_05
MPI_scaffold_272_25
CG_Elusi_05, Elusimicrobia, Bacteria

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comp(20258..20497)
DNA (240bp) protein (80aa)
Tax=CG_Elusi_05
MPI_scaffold_272_26

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comp(20917..22938)
DNA (2022bp) protein (674aa)
Marine sediment metagenome DNA, contig: S01H1_L01978 {ECO:0000313|EMBL:GAF68582.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
O-antigen polymerase
O-antigen ligase-related protein
MPI_scaffold_272_27

Not on your lists

comp(23053..23490)
DNA (438bp) protein (146aa)
Marine sediment metagenome DNA, contig: S01H1_L03717 {ECO:0000313|EMBL:GAF74946.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
oxpG; type II secretion system pseudopilin OxpG
Type II secretion system pseudopilin OxpG
MPI_scaffold_272_28
unknown

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comp(23985..24164)
DNA (180bp) protein (60aa)
MPI_scaffold_272_29

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comp(24320..24772)
DNA (453bp) protein (151aa)
Marine sediment metagenome DNA, contig: S12H4_L06382 {ECO:0000313|EMBL:GAI83343.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Putative uncharacterized protein alias=gwe2_scaffold_8_679 id=2167640 tax=TA06 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
MPI_scaffold_272_30

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comp(24796..25218)
DNA (423bp) protein (141aa)
Marine sediment metagenome DNA, contig: S03H2_S15117 {ECO:0000313|EMBL:GAH62226.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Putative uncharacterized protein
Displaying items 1-30 of 32 in total

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