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MPI_scaffold_3935_4

Organism: MPI_OP11_39_7

partial RP 33 / 55 MC: 1 BSCG 37 / 51 MC: 4 ASCG 9 / 38 MC: 1
Location: comp(4106..4438)

Top 3 Functional Annotations

Value Algorithm Source
RRM domain-containing RNA-binding protein {ECO:0000313|EMBL:EJE51000.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 102.0
  • Bit_score: 111
  • Evalue 1.00e-21
RNP-1 like RNA-binding protein KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 97.0
  • Bit_score: 103
  • Evalue 4.30e-20
RRM domain-containing RNA-binding protein similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 110
  • Evalue 3.00e-22

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Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGCAATCTGATTCAGATGCAAATCAAGCTAAGGTCTATATCGGTAATTTGCCCTATAGCGTTACCGAAGACAAGCTTCGCGAGATGTGTCAGGAGTTTGGTGAGGTTACATACTGTAAAATCATCACACAGCCTAACACAGATCGTTCAAAGGGTTTTGGCTTTGCTGAGTTCTCTTCACCAGAAGCAGCTCAAGCAGCTATTGAAGCTCTTCATGGCACCGAAATGGATGGCCGCGAGTTAGTGGTTAACATTGCTCGCCCCAGACAGCCCAGAAGCTTTGATCGTTCTCGTGGCAACTATCGCCAAGGTGGATACGATCGAAACAATTAA
PROTEIN sequence
Length: 111
MQSDSDANQAKVYIGNLPYSVTEDKLREMCQEFGEVTYCKIITQPNTDRSKGFGFAEFSSPEAAQAAIEALHGTEMDGRELVVNIARPRQPRSFDRSRGNYRQGGYDRNN*