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MPI_scaffold_6625

Alias: MPI_Nov_Archaeon_40_580_partial_65

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Displaying 9 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_6625_1
RHI_RIF-OD1-04_45_11b, RIF-OD1-4, Parcubacteria, Bacteria

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2..379
DNA (378bp) protein (126aa)
Pilus biogenesis protein tapA Tax=RIFCSPHIGHO2_12_FULL_RIF-OD1-04_45_11b_curated
MPI_scaffold_6625_2
unknown

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405..677
DNA (273bp) protein (91aa)
MPI_scaffold_6625_3
unknown

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694..1008
DNA (315bp) protein (105aa)
MPI_scaffold_6625_4
R_RIF_OD1_06_42_22, RIF-OD1-6, Parcubacteria, Bacteria

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1057..1797
DNA (741bp) protein (247aa)
prepilin peptidase (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_42_22_curated
pilD; type IV prepilin peptidase
Prepilin peptidase
MPI_scaffold_6625_5

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1799..2323
DNA (525bp) protein (175aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN91781.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Tfp pilus assembly protein FimT
MPI_scaffold_6625_6
CG_CPR03_01, CG_CPR03, Bacteria

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2320..2811
DNA (492bp) protein (164aa)
hypothetical protein Tax=CG_CPR03_01
Type 4 fimbrial biogenesis protein PilV alias=gwe2_scaffold_218_12 id=1888995 tax=GWE2_OD1_38_254 species=Pseudomonas stutzeri A1501 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria
MPI_scaffold_6625_7
RIFOXYB1_FULL_RIF_OD1_06_38_37_curated, RIF-OD1-6, Parcubacteria, Bacteria

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2808..3353
DNA (546bp) protein (182aa)
hypothetical protein Tax=RIFOXYB1_FULL_RIF_OD1_06_38_37_curated
Uncharacterized protein
MPI_scaffold_6625_8

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3350..3721
DNA (372bp) protein (124aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN91784.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
MPI_scaffold_6625_9
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

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3721..3936
DNA (216bp) protein (72aa)
DNA ligase, NAD-dependent (EC:6.5.1.2); K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
Lig; NAD-dependent DNA ligase
DNA ligase alias=gwe2_scaffold_23_41 id=1899005 tax=GWE2_OD1_38_254 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
Displaying 9 items

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