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MPI_scaffold_680

Alias: MPI_OD1_33_250_3

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_680_1
CG_CPR03_02, CG_CPR03, Bacteria

Not on your lists

147..827
DNA (681bp) protein (227aa)
hypothetical protein Tax=CG_CPR03_02
small-conductance mechanosensitive ion channel
Small-conductance mechanosensitive ion channel-like protein alias=RAAC4_OD1_9 id=5226871 tax=RAAC4_OD1
MPI_scaffold_680_2
R_RIF_OD1_08_38_39, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


896..2650
DNA (1755bp) protein (585aa)
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_08_38_39_curated
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] alias=gwa2_scaffold_32_36 id=5039904 tax=GW2011_AR20 species=unknown genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_desc=DELETE: see complete genome
Alanine-tRNA ligase
MPI_scaffold_680_3
CG_CPR10_03, CG_CPR10, Bacteria

Not on your lists

2626..3825
DNA (1200bp) protein (400aa)
id=3423165 Tax=CG_CPR10_03
Putative uncharacterized protein
MPI_scaffold_680_4
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

3874..4095
DNA (222bp) protein (74aa)
infA; translation initiation factor IF-1 Tax=CG_CPR10_02
translation initiation factor IF-1
Translation initiation factor IF-1
MPI_scaffold_680_5
R_RIF_OD1_06_38_12b, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists


4223..4612
DNA (390bp) protein (130aa)
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12b_curated
rpsM; 30S ribosomal protein S13
hypothetical protein alias=GW2011A_8_4 id=5801916 tax=GW2011_OD1_1 species=unknown genus=Candidatus Arthromitus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
MPI_scaffold_680_6
GWC1_OD1_38_6, Parcubacteria, Bacteria

Not on your lists


4621..5073
DNA (453bp) protein (151aa)
30S ribosomal protein S11, small subunit ribosomal protein S11 {ECO:0000313|EMBL:KKQ77172.1}; TaxID=1618898 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_6.;"
Ribosomal protein S11
30S ribosomal subunit protein S11 alias=gwe2_scaffold_594_8 id=2104195 tax=GWE2_OD1_ACD81_47_12 species=Candidatus Sulcia muelleri SMDSEM genus=Candidatus Sulcia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes
MPI_scaffold_680_7
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists


5084..5713
DNA (630bp) protein (210aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RBG_13_RIF_OD1_07_37_56_curated
30S ribosomal protein S4
30S ribosomal protein S4
MPI_scaffold_680_8
RIFOXYB1_FULL_RIF_OD1_06_37_44_curated, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

5735..6445
DNA (711bp) protein (237aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFOXYB1_FULL_RIF_OD1_06_37_44_curated
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha alias=gwe2_scaffold_97_82 id=2193081 tax=GWE2_OD1_40_11 species=Eubacterium infirmum F0142 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
MPI_scaffold_680_9
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists


6448..6795
DNA (348bp) protein (116aa)
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RBG_13_RIF_OD1_07_42_11_curated
rplQ; 50S ribosomal protein L17
50S ribosomal protein L17
MPI_scaffold_680_10
GWC1_OD1_38_6, Parcubacteria, Bacteria

Not on your lists


6800..7159
DNA (360bp) protein (120aa)
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 alias= Tax=GWC1_OD1_38_6
50S ribosomal protein L13
50S ribosomal protein L13
MPI_scaffold_680_11
R_RIF_OD1_06_37_25b, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists


7162..7656
DNA (495bp) protein (165aa)
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_37_25b_curated
30S ribosomal protein S9
30S ribosomal protein S9 alias=gwe2_scaffold_97_85 id=2193087 tax=GWE2_OD1_40_11 species=Thermosinus carboxydivorans Nor1 genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes
MPI_scaffold_680_12
GWC1_OD1_38_6, Parcubacteria, Bacteria

Not on your lists

comp(7689..9011)
DNA (1323bp) protein (441aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ77164.1}; TaxID=1618898 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_38_6.;"
transmembrane_regions 21..43 alias=ACDUNK_1203.55625.88G0046,ACDUNK_1203.55625.88_46,ACD1_C00056G00046 id=17328 tax=ACD1 species=OD1-i genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i
MPI_scaffold_680_13
RBG_13_RIF_OD1_07_38_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

9077..10078
DNA (1002bp) protein (334aa)
MreB/Mrl family cell shape determining protein; K03569 rod shape-determining protein MreB and related proteins Tax=RBG_13_RIF_OD1_07_38_11_curated
rod shape-determining protein MreB
sti:Sthe_2367 cell shape determining protein, MreB/Mrl family; K03569 rod shape-determining protein MreB and related proteins alias=ACD15_20631.25462.16G0014,ACD15_20631.25462.16_14,ACD15_C00030G00014 id=8616 tax=ACD15 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi organism_group=OD1-i organism_desc=OD1-i
MPI_scaffold_680_14
R_RIF_OD1_07_48_16, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

10080..11360
DNA (1281bp) protein (427aa)
UDP-N-acetylglucosamine1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_07_48_16_curated
murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7); K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] alias=ACD1_C00007G00025,ACD1_796.49353.87G0025,ACD1_796.49353.87_25 id=16627 tax=ACD1 species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
MPI_scaffold_680_15
CG_CPR10_02, CG_CPR10, Bacteria

Not on your lists

11357..12259
DNA (903bp) protein (301aa)
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=CG_CPR10_02
DNA polymerase III, delta prime subunit (EC:2.7.7.7)
DNA polymerase III, delta prime subunit
MPI_scaffold_680_16
RBG_13_RIF_OD1_07_36_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

12265..12819
DNA (555bp) protein (185aa)
frr; ribosome recycling factor (EC:3.6.5.3); K02838 ribosome recycling factor alias=ACD15_54014.14743.15G0010,ACD15_C00061G00010,ACD15_54014.14743.15_10 id=9098 tax=ACD15 species=Bacillus pumilus genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
ribosome recycling factor; K02838 ribosome recycling factor Tax=RBG_13_RIF_OD1_07_36_15_curated
ribosome-recycling factor
MPI_scaffold_680_17
RBG_16_OP11_39_9b_curated, Microgenomates, Bacteria

Not on your lists

12821..13912
DNA (1092bp) protein (364aa)
membrane-associated zinc metalloprotease; K11749 regulator of sigma E protease [EC:3.4.24.-] Tax=RBG_16_OP11_39_9b_curated
membrane-associated zinc metalloprotease; K01417 [EC:3.4.24.-] alias=ACD50_C00118G00009,ACD50_72014.25789.8G0009,ACD50_72014.25789.8_9 id=72389 tax=ACD50 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OP11 organism_desc=OP11
hypothetical protein
MPI_scaffold_680_18

Not on your lists

13914..15089
DNA (1176bp) protein (392aa)
Prolyl-tRNA synthetase {ECO:0000313|EMBL:KKS26195.1}; TaxID=1618819 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_11.;"
Prolyl-tRNA synthetase
Proline--tRNA ligase
MPI_scaffold_680_19
GWE1_OD1-i_ACD11_lin_49_15, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

15079..15456
DNA (378bp) protein (126aa)
Rod shape-determining protein MreB {ECO:0000313|EMBL:KKW06388.1}; TaxID=1618710 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE1_49_15.;"
MreB/Mrl family cell shape determining protein
cth:Cthe_0088 rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins alias=ACD15_C00061G00012,ACD15_54014.14743.15G0012,ACD15_54014.14743.15_12 id=9099 tax=ACD15 species=Clostridium thermocellum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
Displaying 19 items

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