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MPI_scaffold_770

Alias: MPI_OD1_33_250_4

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_770_1
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

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108..572
DNA (465bp) protein (155aa)
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
50S ribosomal protein L19
50S ribosomal protein L19
MPI_scaffold_770_2
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

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919..1512
DNA (594bp) protein (198aa)
beta-lactamase fold-like Zn-dependent hydrolase Tax=RBG_13_RIF_OD1_07_42_11_curated
Zn-dependent hydrolase of the beta-lactamase fold-like protein
Zn-dependent hydrolase of the beta-lactamase fold-like protein alias=ACD7_4610.3935.13G0001,ACD8_C00001G00001,ACD7_4610.3935.13_1 id=136364 tax=ACD8 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
MPI_scaffold_770_3
RBG_13_RIF_OD1_07_36_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

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1514..3988
DNA (2475bp) protein (825aa)
DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] Tax=RBG_13_RIF_OD1_07_36_15_curated
DNA gyrase subunit A (EC:5.99.1.3)
sti:Sthe_1721 DNA gyrase, A subunit (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] alias=ACD15_C00046G00031,ACD15_19057.52719.18G0031,ACD15_19057.52719.18_31 id=8954 tax=ACD15 species=candidate division TM7 single-cell isolate TM7a genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i
MPI_scaffold_770_4

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4024..4545
DNA (522bp) protein (174aa)
Marine sediment metagenome DNA, contig: S01H4_S00217 {ECO:0000313|EMBL:GAG83304.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_770_5
GWA1_OD1_39_13_partial, Yanofskybacteria, Parcubacteria, Bacteria

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4518..5027
DNA (510bp) protein (170aa)
hypothetical protein cdivTM_30113 Tax=GWA1_OD1_39_13_partial
transmembrane_regions 5..24 alias=ACD81_188.5539.49G0006,ACD81_188.5539.49_6,ACD81_C00077G00006 id=134012 tax=ACD81 species=OD1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=OD1, not OD1-i organism_group=OD1, not OD1-i organism_desc=OD1
MPI_scaffold_770_6
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

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5041..5337
DNA (297bp) protein (99aa)
membrane protein of unknown function Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
transmembrane_regions 9..31 alias=ACD66_C00064G00003,ACD66_133137.7650.6G0003,ACD66_133137.7650.6_3 id=99167 tax=ACD66 species=OD1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=OD1, not OD1-i organism_group=OD1, not OD1-i organism_desc=OD1
MPI_scaffold_770_7
CG_CPR10_03, CG_CPR10, Bacteria

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5355..5792
DNA (438bp) protein (146aa)
hypothetical protein Tax=CG_CPR10_03
MPI_scaffold_770_8
R_RIF_OD1_07_48_16, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(5953..6306)
DNA (354bp) protein (118aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_07_48_16_curated
heat-shock protein Hsp20
Small heat shock protein
MPI_scaffold_770_9
RHI_RIF_OD1_06_38_11, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(6310..7014)
DNA (705bp) protein (235aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_06_38_11_curated
hypothetical protein
Putative uncharacterized protein alias=RAAC4_OD1_116 id=5226977 tax=RAAC4_OD1
MPI_scaffold_770_10
R_RIF_OD1_06_37_25b, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists


comp(7007..8131)
DNA (1125bp) protein (375aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57); K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_37_25b_curated
UGMP family protein
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp alias=gwe2_scaffold_287_73 id=1941693 tax=GWE2_OD1_ACD81_47_12 species=Moorella thermoacetica ATCC 39073 genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes
MPI_scaffold_770_11

Not on your lists

8212..9609
DNA (1398bp) protein (466aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN87594.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
protein-export membrane protein SecD
Preprotein translocase subunit SecD alias=gwe2_scaffold_297_52 id=1947855 tax=GWE2_OD1_40_11 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
MPI_scaffold_770_12
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9594..10508
DNA (915bp) protein (305aa)
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=1499107 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="S
protein-export membrane protein SecF
Protein translocase subunit SecF alias=gwe2_scaffold_101_66 id=1744031 tax=GWE2_OD1_38_254 species=Halothermothrix orenii H 168 genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes
MPI_scaffold_770_13
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10505..11458
DNA (954bp) protein (318aa)
Uncharacterized protein {ECO:0000313|EMBL:KFO68710.1}; TaxID=1499107 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCAD
hypothetical protein
transcription initiation factor sigma 70 alias=gwe2_scaffold_297_50 id=1947791 tax=GWE2_OD1_40_11 species=Gemmata obscuriglobus UQM 2246 genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes
MPI_scaffold_770_14
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11461..12774
DNA (1314bp) protein (438aa)
Uncharacterized protein {ECO:0000313|EMBL:KFO68711.1}; TaxID=1499107 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCAD
alias=gwe2_scaffold_198_5 id=1869201 tax=GWE2_OD1_ACD81_47_12
MPI_scaffold_770_15
Smithella sp. SCADC, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12782..14326
DNA (1545bp) protein (515aa)
Uncharacterized protein {ECO:0000313|EMBL:KFO68712.1}; TaxID=1499107 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SCAD
hypothetical protein
Putative uncharacterized protein alias=gwe2_scaffold_397_73 id=2009078 tax=GWE2_OD1_46_68 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown
Displaying 15 items

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