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MPI_scaffold_1927

Alias: MPI_WS6_34_12_partial_45

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Displaying 12 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_1927_1
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

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comp(1..135)
DNA (135bp) protein (45aa)
transcriptional regulator NrdR Tax=RIFOXYB1_FULL_WS6_33_15_curated
Transcriptional repressor NrdR alias=gwf1_scaffold_68_69 id=5102339 tax=WS6_GWF1_36_7 species=Treponema vincentii genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_desc=RuBisCO project
MPI_scaffold_1927_2

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328..840
DNA (513bp) protein (171aa)
cytidyltransferase-related domain protein (EC:2.7.7.39)
Uncharacterized protein {ECO:0000313|EMBL:KKP54394.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
Putative uncharacterized protein
MPI_scaffold_1927_3
GWF1_WS6_35_23_partial, WS6, Bacteria

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comp(845..1768)
DNA (924bp) protein (308aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] alias=ACD81_1824.4615.45G0008,ACD81_1824.4615.45_8,ACD81_C00045G00008 id=133755 tax=ACD81 species=Caldivirga maquilingensis genus=Caldivirga taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota organism_group=OD1, not OD1-i organism_desc=OD1
Thioredoxin reductase (TrxB-3) {ECO:0000313|EMBL:KKP78207.1}; TaxID=1619097 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_35_23.;"
thioredoxin reductase
MPI_scaffold_1927_4
unknown

Not on your lists

comp(1933..2082)
DNA (150bp) protein (50aa)
MPI_scaffold_1927_5
unknown

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comp(2057..2236)
DNA (180bp) protein (60aa)
MPI_scaffold_1927_6
GWE1_WS6_34_7, WS6, Bacteria

Not on your lists

comp(2384..3127)
DNA (744bp) protein (248aa)
methionine aminopeptidase, type I (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] alias=gwe1_scaffold_1177_15 id=5100720 tax=WS6_GWE1_33_547 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria organism_desc=RuBisCO project-Rubisco Fragmented into 3
Methionine aminopeptidase {ECO:0000313|EMBL:KKP65757.1}; TaxID=1619093 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWE1_34_7.;"
methionine aminopeptidase type I
MPI_scaffold_1927_7
unknown

Not on your lists

comp(3117..3419)
DNA (303bp) protein (101aa)
MPI_scaffold_1927_8
GWF1_WS6_36_8, WS6, Bacteria

Not on your lists

comp(3457..4623)
DNA (1167bp) protein (389aa)
Exodeoxyribonuclease V {ECO:0000313|EMBL:KKQ18017.1}; TaxID=1619098 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_36_8.;"
hypothetical protein
Exodeoxyribonuclease V alias=gwe2_scaffold_1482_2 id=5085915 tax=GWE2_WS6_33_161 species=unknown genus=Bartonella taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_desc=RuBisCO project
MPI_scaffold_1927_9

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4653..6104
DNA (1452bp) protein (484aa)
Cytochrome c biogenesis protein {ECO:0000313|EMBL:KKP54361.1}; TaxID=1619088 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWB1_33_6.;"
cytochrome c biogenesis transmembrane protein
Cytochrome c biogenesis protein alias=gwe2_scaffold_1482_3 id=5085916 tax=GWE2_WS6_33_161 species=Candidatus Nanosalinarum sp. J07AB56 genus=Candidatus Nanosalinarum taxon_order=unknown taxon_class=Nanohaloarchaea phylum=Euryarchaeota organism_desc=RuBisCO project
MPI_scaffold_1927_10
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

Not on your lists

comp(6101..6616)
DNA (516bp) protein (172aa)
Peptidylprolyl isomerase (EC:5.2.1.8) Tax=RIFOXYB1_FULL_WS6_33_15_curated
fkpA; peptidylprolyl isomerase, FKBP-type
Peptidyl-prolyl cis-trans isomerase alias=gwe1_scaffold_1177_12 id=5100717 tax=WS6_GWE1_33_547 species=Rhodobacterales bacterium HTCC2255 genus=unknown taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPI_scaffold_1927_11
GWD1_WS6_35_594, WS6, Bacteria

Not on your lists

6751..7164
DNA (414bp) protein (138aa)
Transcriptional regulator, MarR family {ECO:0000313|EMBL:KKP82144.1}; TaxID=1619092 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWD1_35_594.;"
MarR family transcriptional regulator
Transcriptional regulator, MarR family alias=gwc1_scaffold_2368_7 id=5100202 tax=WS6_GWC1_33_22 species=Clostridium saccharoperbutylacetonicum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_desc=RuBisCO project
MPI_scaffold_1927_12
GWF1_WS6_36_8, WS6, Bacteria

Not on your lists

7225..7890
DNA (666bp) protein (222aa)
dnaQ4; DNA polymerase III, epsilon subunit (EC:2.7.7.7); K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] alias=gwe1_scaffold_1177_10 id=5100715 tax=WS6_GWE1_33_547 species=Arcobacter butzleri genus=Arcobacter taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria organism_desc=RuBisCO project-Rubisco Fragmented into 3
Exonuclease RNase T and DNA polymerase III {ECO:0000313|EMBL:KKQ15762.1}; TaxID=1619098 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_36_8.;"
DNA polymerase III subunit epsilon
Displaying 12 items

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