ggKbase home page

MPI_scaffold_3001

Alias: MPI_WS6_34_12_partial_65

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
MPI_scaffold_3001_1
unknown

Not on your lists

43..678
-----------------
DNA (636bp)
protein (212aa)
MPI_scaffold_3001_2
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

789..1964
-----------------
DNA (1176bp)
protein (392aa)
peptidase S41
Peptidase S41
MPI_scaffold_3001_3
unknown

Not on your lists

comp(2158..2580)
-----------------
DNA (423bp)
protein (141aa)
MPI_scaffold_3001_4
RIFOXYB1_FULL_WS6_33_15_curated, Dojkabacteria, Bacteria

Not on your lists

comp(2581..3177)
-----------------
DNA (597bp)
protein (199aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit alias=gwc1_scaffold_376_48 id=5099880 tax=WS6_GWC1_33_22 species=unknown genus=Granulicatella taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes organism_desc=RuBisCO project
MPI_scaffold_3001_5
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

comp(3164..4207)
-----------------
DNA (1044bp)
protein (348aa)
tig; trigger factor (EC:5.2.1.8)
trigger factor; K03545 trigger factor alias=gwe1_scaffold_4634_4 id=5100919 tax=WS6_GWE1_33_547 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPI_scaffold_3001_6
GWD1_WS6_35_594, WS6, Bacteria

Not on your lists

comp(4247..4939)
-----------------
DNA (693bp)
protein (231aa)
LPXTG-site transpeptidase (sortase) family protein
Uncharacterized protein yhcS alias=gwe1_scaffold_4634_5 id=5100920 tax=WS6_GWE1_33_547 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown organism_desc=RuBisCO project-Rubisco Fragmented into 3
MPI_scaffold_3001_7
GWE1_WS6_34_7, WS6, Bacteria

Not on your lists

5033..5809
-----------------
DNA (777bp)
protein (259aa)
transmembrane_regions alias=gwe1_scaffold_4634_6 id=5100921 tax=WS6_GWE1_33_547 organism_desc=RuBisCO project-Rubisco Fragmented into 3
Displaying 7 items

View Taxonomy