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MPI_scaffold_1740

Alias: MPI_Thermoplasmata_48_13_8

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_1740_1
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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1..357
-----------------
DNA (357bp)
protein (119aa)
aroB'; 3-dehydroquinate synthase (EC:1.4.1.24)
AroB' protein {ECO:0000313|EMBL:AIZ56914.1}; EC=1.4.1.24 {ECO:0000313|EMBL:AIZ56914.1};; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccacea
3-dehydroquinate synthase homolog
MPI_scaffold_1740_2
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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354..1694
-----------------
DNA (1341bp)
protein (447aa)
aroE; shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=1577791 species="Archaea; Eurya
Shikimate 5-dehydrogenase I alpha
MPI_scaffold_1740_3
Candidatus Methanomethylophilus alvus, Candidatus Methanomethylophilus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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1691..2515
-----------------
DNA (825bp)
protein (275aa)
Shikimate kinase II, AroE II (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00370}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00370};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00370};; TaxID=1236689 species="Archaea; Euryarchaeota; Thermopl
Shikimate kinase II, AroE II
MPI_scaffold_1740_4
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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2512..3768
-----------------
DNA (1257bp)
protein (419aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_0
3-phosphoshikimate 1-carboxyvinyltransferase rbh
5-Enolpyruvylshikimate-3-phosphate synthase
MPI_scaffold_1740_5
Thermoplasmatales archaeon BRNA1, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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3765..4838
-----------------
DNA (1074bp)
protein (358aa)
chorismate synthase (EC:4.2.3.5) rbh
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
Chorismate synthase
MPI_scaffold_1740_6
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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4828..5877
-----------------
DNA (1050bp)
protein (350aa)
aroQ; chorismate mutase / prephenate dehydrogenase (EC:5.4.99.5)
AroQ protein {ECO:0000313|EMBL:AIZ56915.1}; EC=5.4.99.5 {ECO:0000313|EMBL:AIZ56915.1};; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae
Prephenate dehydrogenase
MPI_scaffold_1740_7
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(5865..7514)
-----------------
DNA (1650bp)
protein (550aa)
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012};; TaxID=1295009 species="Archaea; Euryarchaeota
Dihydroxy-acid dehydratase
MPI_scaffold_1740_8
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(7609..7923)
-----------------
DNA (315bp)
protein (105aa)
30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicocca
SSU ribosomal protein S10P
MPI_scaffold_1740_9
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(7958..8452)
-----------------
DNA (495bp)
protein (165aa)
tuf1; elongation factor 1-alpha
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
Elongation factor 1-alpha
Displaying 9 items

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