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MPI_scaffold_2480

Alias: MPI_Thermoplasmata_48_13_16

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_2480_1
RBG_13_Euryarchaeota_61_15_curated, Euryarchaeota, Archaea

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comp(2..88)
-----------------
DNA (87bp)
protein (29aa)
elongation factor EF-2 Tax=RBG_13_Euryarchaeota_61_15_curated
Translation elongation factor 2 (EF-2/EF-G)
MPI_scaffold_2480_2
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(120..710)
-----------------
DNA (591bp)
protein (197aa)
rps7; 30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanoplasma.;
SSU ribosomal protein S5e (S7p)
MPI_scaffold_2480_3
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(707..1135)
-----------------
DNA (429bp)
protein (143aa)
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicocca
SSU ribosomal protein S23e (S12p)
MPI_scaffold_2480_4
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1298..1660)
-----------------
DNA (363bp)
protein (121aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:AGN26790.1}; EC=3.1.1.29 {ECO:0000313|EMBL:AGN26790.1};; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassil
Peptidyl-tRNA hydrolase
MPI_scaffold_2480_5
unknown

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1742..2146
-----------------
DNA (405bp)
protein (135aa)
MPI_scaffold_2480_6
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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2221..4161
-----------------
DNA (1941bp)
protein (647aa)
tgtA1; tRNA-guanine(15) transglycosylase (EC:2.4.2.48) rbh
tRNA-guanine(15) transglycosylase {ECO:0000256|HAMAP-Rule:MF_01634}; EC=2.4.2.48 {ECO:0000256|HAMAP-Rule:MF_01634};; 7-cyano-7-deazaguanine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01634}; A
tRNA-guanine transglycosylase, archaeosine-15-forming
MPI_scaffold_2480_7
Methanoculleus sp. CAG:1088, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4126..4419)
-----------------
DNA (294bp)
protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:CDF30572.1}; TaxID=1262903 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus; environmental samples.;"
Uncharacterized protein
MPI_scaffold_2480_8
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(4775..6022)
-----------------
DNA (1248bp)
protein (416aa)
miaB1; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase (EC:2.8.4.3)
MiaB1 protein {ECO:0000313|EMBL:AIZ56906.1}; EC=2.8.4.3 {ECO:0000313|EMBL:AIZ56906.1};; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae
tRNA N6-threonylcarbamoyladenosine 2-methylthiotransferase (Putative) / tRNA-i(6)A37 methylthiotransferase
MPI_scaffold_2480_9
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(6033..6650)
-----------------
DNA (618bp)
protein (206aa)
translation initiation factor IF-2 subunit beta
Translation initiation factor 2 subunit beta {ECO:0000256|HAMAP-Rule:MF_00232}; aIF2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; eIF-2-beta {ECO:0000256|HAMAP-Rule:MF_00232}; TaxID=1295009 species="Archae
Eukaryotic translation initiation factor 2 beta subunit
Displaying 9 items

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