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MPI_scaffold_5057

Alias: MPI_Thermoplasmata_48_13_60

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_5057_1
Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO), Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

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comp(1..189)
-----------------
DNA (189bp)
protein (63aa)
ABC-2 type transporter
MPI_scaffold_5057_2
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(186..413)
-----------------
DNA (228bp)
protein (76aa)
ABC transporter
ABC transporter {ECO:0000313|EMBL:AGN26191.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Methanomassiliicoccus.;" source="Candid
ABC transporter
MPI_scaffold_5057_3
Candidatus Methanomethylophilus alvus, Candidatus Methanomethylophilus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(410..1129)
-----------------
DNA (720bp)
protein (240aa)
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGI85043.1}; TaxID=1236689 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methano
ABC transporter, ATP-binding protein
MPI_scaffold_5057_4
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1244..1603)
-----------------
DNA (360bp)
protein (120aa)
pfdB; prefoldin subunit beta
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; M
Prefoldin beta subunit (GimC beta subunit)
MPI_scaffold_5057_5
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1590..1838)
-----------------
DNA (249bp)
protein (83aa)
transcription factor Pcc1
Candidatus Methanoplasma termitum strain MpT1, complete genome {ECO:0000313|EMBL:AIZ56936.1}; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoc
Uncharacterized protein
MPI_scaffold_5057_6
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(2000..2260)
-----------------
DNA (261bp)
protein (87aa)
50S ribosomal protein L37Ae
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliic
LSU ribosomal protein L37Ae
MPI_scaffold_5057_7
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(2257..3030)
-----------------
DNA (774bp)
protein (258aa)
exosome complex component Rrp42
Exosome complex component Rrp42 {ECO:0000256|HAMAP-Rule:MF_00622}; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanop
RNase PH-related exoribonuclease
MPI_scaffold_5057_8
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(3027..3749)
-----------------
DNA (723bp)
protein (241aa)
exosome complex component Rrp41 (EC:3.1.13.-) rbh
Exosome complex component Rrp41 {ECO:0000256|HAMAP-Rule:MF_00591}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00591};; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccale
Putative exosome complex exonuclease 1
MPI_scaffold_5057_9
Candidatus Methanomethylophilus alvus, Candidatus Methanomethylophilus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(3787..3990)
-----------------
DNA (204bp)
protein (68aa)
putative exosome complex RNA-binding protein 1
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=1236689 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanome
Putative exosome complex RNA-binding protein 1
Displaying 9 items

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