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MPI_scaffold_8

Alias: MPI_JS1_34_150_partial_16

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Displaying items 1-30 of 142 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_8_1

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359..1246
DNA (888bp) protein (296aa)
Marine sediment metagenome DNA, contig: S01H4_C00054 {ECO:0000313|EMBL:GAG62793.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
UPF0042 nucleotide-binding protein TherJR_2719
MPI_scaffold_8_2

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1289..2221
DNA (933bp) protein (311aa)
Marine sediment metagenome DNA, contig: S01H4_C00054 {ECO:0000313|EMBL:GAG62789.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
protein of unknown function DUF199
Putative sporulation transcription regulator WhiA
MPI_scaffold_8_3
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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2362..3462
DNA (1101bp) protein (367aa)
Maltose/maltodextrin transport ATP-binding protein MalK ; Multiple sugar ABC transporter, ATP-binding protein (EC:3.6.3.19) Tax=RBG_19FT_COMBO_JS1_35_14_curated
ABC transporter-like protein
Sugar ABC transporter, ATP-binding protein
MPI_scaffold_8_4

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3556..5085
DNA (1530bp) protein (510aa)
Marine sediment metagenome DNA, contig: S01H4_C00207 {ECO:0000313|EMBL:GAG67594.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
RNA polymerase, sigma 54 subunit, RpoN/SigL
RNA polymerase, sigma 54 subunit, RpoN/SigL
MPI_scaffold_8_5

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5213..6208
DNA (996bp) protein (332aa)
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Marine sediment metagenome DNA, contig: S03H2_C02612 {ECO:0000313|EMBL:GAH30038.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Glyceraldehyde-3-phosphate dehydrogenase, type I
MPI_scaffold_8_6

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6360..7121
DNA (762bp) protein (254aa)
Triose-phosphate isomerase (EC:5.3.1.1)
Marine sediment metagenome DNA, contig: S06H3_S02825 {ECO:0000313|EMBL:GAI22318.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Triosephosphate isomerase
MPI_scaffold_8_7

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7497..7721
DNA (225bp) protein (75aa)
Marine sediment metagenome DNA, contig: S03H2_S15401 {ECO:0000313|EMBL:GAH64221.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
preprotein translocase subunit SecG
Preprotein translocase, SecG subunit
MPI_scaffold_8_8
CG_OP9-01, Atribacteria, Bacteria

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7741..8778
DNA (1038bp) protein (346aa)
PncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11); K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11] Tax=CG_OP9-01
PncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Quinolinate phosphoribosyl transferase
MPI_scaffold_8_9

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8809..9837
DNA (1029bp) protein (343aa)
appD; oligopeptide ABC transporter (ATP-binding protein) (EC:3.6.3.-)
Marine sediment metagenome DNA, contig: S12H4_L00945 {ECO:0000313|EMBL:GAI82579.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)
MPI_scaffold_8_10
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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10172..11146
DNA (975bp) protein (325aa)
oligopeptide ABC transporter ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein Tax=RBG_16_Armatimonadetes_67_12_curated
oligopeptide/dipeptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit
MPI_scaffold_8_11
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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11645..11986
DNA (342bp) protein (114aa)
hypA2; hydrogenase nickel incorporation protein HypA; K04651 hydrogenase nickel incorporation protein HypA/HybF Tax=RBG_13_Actinobacteria_35_12_curated
hypA2; hydrogenase nickel incorporation protein HypA
Probable hydrogenase nickel incorporation protein HypA
MPI_scaffold_8_12

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12079..12588
DNA (510bp) protein (170aa)
Marine sediment metagenome DNA, contig: S01H1_C00866 {ECO:0000313|EMBL:GAF83571.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
cation antiporter
Na+/H+ ion antiporter subunit family
MPI_scaffold_8_13
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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12585..12857
DNA (273bp) protein (91aa)
membrane bound hydrogenase MbhB-like subunit; K05570 multicomponent Na+:H+ antiporter subunit F Tax=RBG_13_Actinobacteria_35_12_curated
Membrane bound hydrogenase, MbhB subunit
Membrane bound hydrogenase MbhB-like subunit
MPI_scaffold_8_14
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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12857..13219
DNA (363bp) protein (121aa)
monovalent cation/proton antiporter, MnhG/PhaG subunit; K05571 multicomponent Na+:H+ antiporter subunit G Tax=RBG_13_Actinobacteria_35_12_curated
monovalent cation/proton antiporter, MnhG/PhaG subunit
Monovalent cation/proton antiporter, MnhG/PhaG subunit
MPI_scaffold_8_15

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13216..13455
DNA (240bp) protein (80aa)
Marine sediment metagenome DNA, contig: S06H3_S25169 {ECO:0000313|EMBL:GAI47423.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
putative monovalent cation/H+ antiporter subunit B
Putative monovalent cation/H+ antiporter subunit B
MPI_scaffold_8_16
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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13468..13734
DNA (267bp) protein (89aa)
Membrane-bound hydrogenase MBH 2, subunit Mbh2E (Na+/H+ transporter subunit) Tax=RBG_13_Actinobacteria_35_12_curated
Membrane-bound hydrogenase MBH 2, subunit Mbh2E (Na+/H+ transporter subunit)
pH adaptation potassium efflux system protein B1 sodium-potassium/hydrogen antiporter subunit B1
MPI_scaffold_8_17

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13731..14207
DNA (477bp) protein (159aa)
Marine sediment metagenome DNA, contig: S03H2_C00862 {ECO:0000313|EMBL:GAH25937.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
multisubunit Na+/H+ antiporter, MnhB subunit
Multisubunit Na+/H+ antiporter, MnhB subunit
MPI_scaffold_8_18
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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14209..14556
DNA (348bp) protein (116aa)
NADH-ubiquinone oxidoreductase chain 4L; K05567 multicomponent Na+:H+ antiporter subunit C Tax=RBG_13_Actinobacteria_35_12_curated
NADH-ubiquinone oxidoreductase chain 4L
NADH-ubiquinone oxidoreductase chain 4L
MPI_scaffold_8_19
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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14553..16118
DNA (1566bp) protein (522aa)
NADH/Ubiquinone/plastoquinone (complex I); K05568 multicomponent Na+:H+ antiporter subunit D Tax=RBG_13_Actinobacteria_35_12_curated
NADH/Ubiquinone/plastoquinone (complex I)
NADH-Ubiquinone/plastoquinone (Complex I), domain protein
MPI_scaffold_8_20

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16122..16463
DNA (342bp) protein (114aa)
Marine sediment metagenome DNA, contig: S03H2_C03469 {ECO:0000313|EMBL:GAH24092.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hydrogenase
Membrane-bound hydrogenase MBH 2, subunit Mbh2I (Na+/H+ transporter subunit)
MPI_scaffold_8_21

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16463..16912
DNA (450bp) protein (150aa)
Marine sediment metagenome DNA, contig: S03H2_C03469 {ECO:0000313|EMBL:GAH24090.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
NADH-quinone oxidoreductase, B subunit
NADH-quinone oxidoreductase, B subunit
MPI_scaffold_8_22

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17158..17724
DNA (567bp) protein (189aa)
Marine sediment metagenome DNA, contig: S01H1_C01495 {ECO:0000313|EMBL:GAF72586.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
NADH dehydrogenase (ubiquinone) 30 kDa subunit
Ni,Fe-hydrogenase III component G
MPI_scaffold_8_23
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

17717..18940
DNA (1224bp) protein (408aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5) Tax=RBG_13_Actinobacteria_35_12_curated
NADH dehydrogenase (quinone) (EC:1.6.99.5)
Ni,Fe-hydrogenase III large subunit
MPI_scaffold_8_24
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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18937..19950
DNA (1014bp) protein (338aa)
respiratory-chain NADH dehydrogenase subunit 1 Tax=RBG_19FT_COMBO_JS1_35_14_curated
formate hydrogenlyase subunit 4
NADH dehydrogenase superfamily
MPI_scaffold_8_25

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19960..20361
DNA (402bp) protein (134aa)
Marine sediment metagenome DNA, contig: S01H4_C01811 {ECO:0000313|EMBL:GAG73384.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
MPI_scaffold_8_26

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comp(20397..20846)
DNA (450bp) protein (150aa)
Marine sediment metagenome DNA, contig: S03H2_S00032 {ECO:0000313|EMBL:GAH61026.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hydrogenase maturation protease
Peptidase A31, hydrogenase maturation protease HycI
MPI_scaffold_8_27

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21318..21908
DNA (591bp) protein (197aa)
Marine sediment metagenome DNA, contig: S01H4_C00496 {ECO:0000313|EMBL:GAG72976.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
sporulation domain-containing protein
Sporulation domain protein
MPI_scaffold_8_28

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21926..22558
DNA (633bp) protein (211aa)
Marine sediment metagenome DNA, contig: S03H2_S03002 {ECO:0000313|EMBL:GAH52709.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
AT-rich DNA-binding protein
Redox-sensing transcriptional repressor rex
MPI_scaffold_8_29
CG_OP9-01, Atribacteria, Bacteria

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22778..23803
DNA (1026bp) protein (342aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=CG_OP9-01
4Fe-4S ferredoxin iron-sulfur binding domain protein
4Fe-4S ferredoxin iron-sulfur binding domain protein
MPI_scaffold_8_30

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23793..24620
DNA (828bp) protein (276aa)
Marine sediment metagenome DNA, contig: S03H2_C00018 {ECO:0000313|EMBL:GAH25539.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
oxidoreductase FAD/NAD(P)-binding domain protein
Oxidoreductase FAD/NAD(P)-binding domain protein
Displaying items 1-30 of 142 in total

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