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MPI_scaffold_143

Alias: MPI_JS1_34_150_partial_27

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_143_1
unknown

Not on your lists

comp(1..66)
DNA (66bp) protein (22aa)
MPI_scaffold_143_2
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(273..1337)
DNA (1065bp) protein (355aa)
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; K00768 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] Tax=RBG_19FT_COMBO_JS1_35_14_c
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
Nicotinate-nucleotide-dimethylbenzimidazolephosph oribosyltransferase
MPI_scaffold_143_3
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(1330..2064)
DNA (735bp) protein (245aa)
alpha-ribazole phosphatase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=RBG_19FT_COMBO_JS1_35_14_curated
alpha-ribazole phosphatase
Alpha-ribazole phosphatase
MPI_scaffold_143_4
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(2499..3122)
DNA (624bp) protein (208aa)
amino acid transporter LysE Tax=RBG_19FT_COMBO_JS1_35_14_curated
LysE family transporter
Lysine exporter protein (LYSE/YGGA)
MPI_scaffold_143_5
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(3285..3842)
DNA (558bp) protein (186aa)
hypothetical protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
hypothetical protein
Putative manganese efflux pump MntP
MPI_scaffold_143_6

Not on your lists

comp(4191..4424)
DNA (234bp) protein (78aa)
Marine sediment metagenome DNA, contig: S01H4_S12604 {ECO:0000313|EMBL:GAG96663.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
glutaredoxin
Glutaredoxin-like protein, YruB-family alias=gwe1_scaffold_5_168,ACD58_39_12_C00001G00168 id=1263371 tax=ACD58_39_12 species=Clostridium clariflavum DSM 19732 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
MPI_scaffold_143_7
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4610..5497)
DNA (888bp) protein (296aa)
diguanylate cyclase and metal dependent phosphohydrolase Tax=RBG_13_Deltaproteobacteria_52_11_curated
cph; phytochrome-like protein Cph
Phytochrome-like protein Cph
MPI_scaffold_143_8
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(5982..6647)
DNA (666bp) protein (222aa)
ltrA; RNA-directed DNA polymerase (Reverse transcriptase) Tax=CG_OP9-01
Retron-type reverse transcriptase
RNA-directed DNA polymerase (Reverse transcriptase)
MPI_scaffold_143_9
unknown

Not on your lists

7008..7205
DNA (198bp) protein (66aa)
MPI_scaffold_143_10

Not on your lists

7233..7502
DNA (270bp) protein (90aa)
Marine sediment metagenome DNA, contig: S01H4_C03738 {ECO:0000313|EMBL:GAG60708.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
MPI_scaffold_143_11
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(7629..8069)
DNA (441bp) protein (147aa)
protein tyrosine phosphatase; K03741 arsenate reductase [EC:1.20.4.1] Tax=RBG_19FT_COMBO_JS1_35_14_curated
protein tyrosine phosphatase
Protein tyrosine phosphatase
MPI_scaffold_143_12
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(8204..9562)
DNA (1359bp) protein (453aa)
major facilitator transporter; K03292 glycoside/pentoside/hexuronide:cation symporter, GPH family Tax=RBG_19FT_COMBO_JS1_35_14_curated
major facilitator transporter
Major facilitator superfamily MFS_1
MPI_scaffold_143_13

Not on your lists

comp(9592..10671)
DNA (1080bp) protein (360aa)
Marine sediment metagenome DNA, contig: S01H4_C00374 {ECO:0000313|EMBL:GAG71467.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
MPI_scaffold_143_14

Not on your lists

comp(10668..11516)
DNA (849bp) protein (283aa)
Marine sediment metagenome DNA, contig: S01H4_C00374 {ECO:0000313|EMBL:GAG71470.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
MPI_scaffold_143_15
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(11513..13306)
DNA (1794bp) protein (598aa)
hypothetical protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
hypothetical protein
Uncharacterized conserved protein UCP028846
MPI_scaffold_143_16

Not on your lists

comp(13560..14321)
DNA (762bp) protein (254aa)
Marine sediment metagenome DNA, contig: S01H1_L00495 {ECO:0000313|EMBL:GAF84136.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
glucosamine-6-phosphate isomerase
Glucosamine-6-phosphate deaminase
MPI_scaffold_143_17
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(14311..15486)
DNA (1176bp) protein (392aa)
nagA; N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25); K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] Tax=RBG_19FT_COMBO_JS1_35_14_curated
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase
MPI_scaffold_143_18
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15513..16925)
DNA (1413bp) protein (471aa)
FAD linked oxidase
FAD linked oxidase domain protein {ECO:0000313|EMBL:ADL69172.1}; TaxID=580327 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Ther
FAD linked oxidase domain protein
MPI_scaffold_143_19
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16922..17929)
DNA (1008bp) protein (336aa)
electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ADL69173.1}; TaxID=580327 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae
Electron transfer flavoprotein alpha subunit
MPI_scaffold_143_20
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17947..18744)
DNA (798bp) protein (266aa)
electron transfer flavoprotein alpha/beta-subunit
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:ADL69174.1}; TaxID=580327 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Ince
Electron transfer flavoprotein alpha/beta-subunit
MPI_scaffold_143_21
MPF_Petrotoga_mobilis_34_12, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(18816..20003)
DNA (1188bp) protein (396aa)
Anhydro-N-acetylmuramic acid kinase Tax=MPF_Petrotoga_mobilis_34_12
anmK; anhydro-N-acetylmuramic acid kinase
Anhydro-N-acetylmuramic acid kinase
MPI_scaffold_143_22
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20089..21174)
DNA (1086bp) protein (362aa)
AmpC; Beta-lactamase class C and other penicillin binding proteins
Beta-lactamase {ECO:0000313|EMBL:EEB76645.1}; Beta-lactamase class C and other penicillin binding protein {ECO:0000313|EMBL:KKC30779.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoa
Beta-lactamase class C and other penicillin binding proteins
MPI_scaffold_143_23
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(21480..22322)
DNA (843bp) protein (281aa)
ABC transporter inner membrane protein
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:ADY14327.1}; Flags: Precursor;; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source
ABC-type transporter, integral membrane subunit
MPI_scaffold_143_24
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(22334..23284)
DNA (951bp) protein (317aa)
ABC transporter inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=GWC1_Treponema_61_84_curated
ABC transporter inner membrane protein
ABC-type transporter, integral membrane subunit
MPI_scaffold_143_25
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(23339..24859)
DNA (1521bp) protein (507aa)
ABC transporter periplasmic protein Tax=GWC1_Treponema_61_84_curated
ABC transporter periplasmic protein
ABC-type transporter, periplasmic subunit
MPI_scaffold_143_26
Bacillus hemicellulosilyticus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25149..25646)
DNA (498bp) protein (166aa)
Acetyltransferase {ECO:0000313|EMBL:GAE31630.1}; TaxID=1236971 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus hemicellulosilyticus JCM 9152.;"
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase
MPI_scaffold_143_27
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(25932..26831)
DNA (900bp) protein (300aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMA
murQ; N-acetylmuramic acid 6-phosphate etherase
N-acetylmuramic acid 6-phosphate etherase
MPI_scaffold_143_28
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26875..27747)
DNA (873bp) protein (291aa)
Transcriptional regulator {ECO:0000313|EMBL:ERM93328.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaer
RpiR4; transcriptional regulator
Transcriptional regulator
MPI_scaffold_143_29
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(28068..28283)
DNA (216bp) protein (72aa)
NLP/P60 protein Tax=RBG_13_Actinobacteria_35_12_curated
NLP/P60 protein
NLP/P60 protein
MPI_scaffold_143_30
GWA2_WOR_2_53_43_curated, WOR-2, Bacteria

Not on your lists

comp(28304..28804)
DNA (501bp) protein (167aa)
transposase IS200-family protein; K07491 putative transposase Tax=GWA2_WOR_2_53_43_curated
transposase
Putative transposase
Displaying items 1-30 of 33 in total

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