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MPI_scaffold_278

Alias: MPI_JS1_34_150_partial_37

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_278_1

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comp(1..1425)
DNA (1425bp) protein (475aa)
Marine sediment metagenome DNA, contig: S01H4_C00029 {ECO:0000313|EMBL:GAG61882.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
PAS and GAF sensor-containing diguanylate cyclase
Diguanylate cyclase with PAS/PAC sensor
MPI_scaffold_278_2
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(1762..2646)
DNA (885bp) protein (295aa)
periplasmic binding protein/LacI transcriptional regulator; K10439 ribose transport system substrate-binding protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
periplasmic binding protein/LacI transcriptional regulator
Monosaccharide-transporting ATPase
MPI_scaffold_278_3

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comp(2740..3672)
DNA (933bp) protein (311aa)
Marine sediment metagenome DNA, contig: S03H2_L02961 {ECO:0000313|EMBL:GAH35759.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
AraH; ribose/xylose/arabinose/galactoside ABC transporter permease
Inner-membrane translocator
MPI_scaffold_278_4
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(3674..5185)
DNA (1512bp) protein (504aa)
ABC transporter-like protein; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] Tax=RBG_19FT_COMBO_JS1_35_14_curated
ABC transporter-like protein
ABC transporter related protein
MPI_scaffold_278_5

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comp(5182..5571)
DNA (390bp) protein (130aa)
Marine sediment metagenome DNA, contig: S01H4_C01516 {ECO:0000313|EMBL:GAG70266.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
transport protein RbsD/FucU
D-ribose pyranase
MPI_scaffold_278_6
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(5574..6599)
DNA (1026bp) protein (342aa)
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator Tax=RBG_19FT_COMBO_JS1_35_14_curated
LacI family transcriptional regulator
Transcriptional regulator
MPI_scaffold_278_7
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(6596..7501)
DNA (906bp) protein (302aa)
ribokinase; K00852 ribokinase [EC:2.7.1.15] Tax=RBG_19FT_COMBO_JS1_35_14_curated
rbsK; putative ribokinase (EC:2.7.1.15)
Putative ribokinase
MPI_scaffold_278_8

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comp(7625..8008)
DNA (384bp) protein (128aa)
Marine sediment metagenome DNA, contig: S01H4_C00997 {ECO:0000313|EMBL:GAG60188.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
endoribonuclease L-PSP
Endoribonuclease L-PSP, putative
MPI_scaffold_278_9

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comp(8146..8523)
DNA (378bp) protein (126aa)
Marine sediment metagenome DNA, contig: S01H4_S04165 {ECO:0000313|EMBL:GAG84337.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Putative protein-S-isoprenylcysteine methyltransferase
isoprenylcysteine carboxyl methyltransferase
MPI_scaffold_278_10

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comp(8804..10699)
DNA (1896bp) protein (632aa)
Marine sediment metagenome DNA, contig: S01H4_S05551 {ECO:0000313|EMBL:GAH05169.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Uncharacterized protein
MPI_scaffold_278_11

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comp(10857..11639)
DNA (783bp) protein (261aa)
Marine sediment metagenome DNA, contig: S01H4_C01451 {ECO:0000313|EMBL:GAG69131.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
isoprenylcysteine carboxyl methyltransferase
Isoprenylcysteine carboxyl methyltransferase
MPI_scaffold_278_12
MPI_TA06_32_111, Bacteria

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comp(11670..12473)
DNA (804bp) protein (268aa)
Uncharacterized protein Tax=MPI_TA06_32_111
hypothetical protein
Uncharacterized protein
MPI_scaffold_278_13

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comp(12658..13839)
DNA (1182bp) protein (394aa)
cystathionine beta-lyase (EC:4.4.1.8)
Marine sediment metagenome DNA, contig: S01H4_C00083 {ECO:0000313|EMBL:GAG63795.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Cystathionine beta-lyase
MPI_scaffold_278_14

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comp(13880..14221)
DNA (342bp) protein (114aa)
Marine sediment metagenome DNA, contig: S12H4_L02451 {ECO:0000313|EMBL:GAI84327.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
DNA methylase-type I restriction-modification system
Type I restriction modification DNA specificity domain protein
MPI_scaffold_278_15

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comp(14277..14423)
DNA (147bp) protein (49aa)
Marine sediment metagenome DNA, contig: S01H4_C00077 {ECO:0000313|EMBL:GAG63559.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
MPI_scaffold_278_16
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(14511..15266)
DNA (756bp) protein (252aa)
hypothetical protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_278_17
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(15310..16050)
DNA (741bp) protein (247aa)
hypothetical protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_278_18

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comp(16319..17269)
DNA (951bp) protein (317aa)
Marine sediment metagenome DNA, contig: S01H4_C00783 {ECO:0000313|EMBL:GAG56345.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
oligopeptide/dipeptide ABC transporter ATPase
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
MPI_scaffold_278_19

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comp(17247..18290)
DNA (1044bp) protein (348aa)
Marine sediment metagenome DNA, contig: S03H2_C01395 {ECO:0000313|EMBL:GAH31007.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
peptide ABC transporter ATPase
Oligopeptide/dipeptide ABC transporter, ATPase subunit
MPI_scaffold_278_20

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comp(18294..19202)
DNA (909bp) protein (303aa)
Marine sediment metagenome DNA, contig: S01H1_L03718 {ECO:0000313|EMBL:GAF74968.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
dipeptide/oligopeptide/nickel ABC transporter permease
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
MPI_scaffold_278_21

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comp(19216..20220)
DNA (1005bp) protein (335aa)
Marine sediment metagenome DNA, contig: S01H4_C04341 {ECO:0000313|EMBL:GAG69728.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
dipeptide/oligopeptide/nickel ABC transporter permease
ABC-type dipeptide/oligopeptide/nickel transport system, permease component
MPI_scaffold_278_22

Not on your lists

comp(20441..22009)
DNA (1569bp) protein (523aa)
Marine sediment metagenome DNA, contig: S01H1_C00226 {ECO:0000313|EMBL:GAF74004.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Extracellular solute-binding protein family 5
ABC-type dipeptide transport system, periplasmic component
MPI_scaffold_278_23

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comp(22122..22877)
DNA (756bp) protein (252aa)
Marine sediment metagenome DNA, contig: S03H2_C00662 {ECO:0000313|EMBL:GAH23489.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
diguanylate cyclase
Diguanylate cyclase
MPI_scaffold_278_24
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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23181..24920
DNA (1740bp) protein (580aa)
metal dependent phosphohydrolase Tax=RBG_19FT_COMBO_JS1_35_14_curated
metal dependent phosphohydrolase
metal dependent phosphohydrolase alias=ACD39_452811.2439.6_2,ACD39_452811.2439.6G0002,ACD39_C00103G00002 id=44683 tax=ACD39 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_desc=unknown
MPI_scaffold_278_25

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comp(24957..25853)
DNA (897bp) protein (299aa)
Marine sediment metagenome DNA, contig: S12H4_C01936 {ECO:0000313|EMBL:GAI65608.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
cysK-3; cysteine synthase A
Cysteine synthase
Displaying 25 items

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