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MPI_scaffold_487

Alias: MPI_JS1_34_150_partial_43

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_487_1

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1..126
DNA (126bp) protein (42aa)
selA; selenocysteine synthase (EC:2.9.1.1)
Marine sediment metagenome DNA, contig: S01H4_S04923 {ECO:0000313|EMBL:GAG99511.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
L-seryl-tRNA(Sec) selenium transferase
MPI_scaffold_487_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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329..955
DNA (627bp) protein (209aa)
phosphotransferase domain-containing protein
Putative PHP domain-containing protein {ECO:0000313|EMBL:BAQ15191.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.
PHP domain protein
MPI_scaffold_487_3
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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955..2010
DNA (1056bp) protein (352aa)
Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:EQK38075.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;"
family 1 extracellular solute-binding protein
ABC transporter
MPI_scaffold_487_4
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

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1970..3703
DNA (1734bp) protein (578aa)
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADE58001.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobact
Binding-protein-dependent transport systems inner membrane component
MPI_scaffold_487_5
Aminobacterium colombiense, Aminobacterium, Synergistales, Synergistia, Synergistetes, Bacteria

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3675..4607
DNA (933bp) protein (311aa)
ABC transporter-like protein rbh
ABC transporter related protein {ECO:0000313|EMBL:ADE58002.1}; TaxID=572547 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Aminobacterium.;" source="Aminobacterium colom
ABC transporter related protein
MPI_scaffold_487_6

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4805..5467
DNA (663bp) protein (221aa)
selD; selenide, water dikinase SelD (EC:2.7.9.3)
Marine sediment metagenome DNA, contig: S01H1_C00045 {ECO:0000313|EMBL:GAF70803.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Selenide, water dikinase
MPI_scaffold_487_7

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5499..6137
DNA (639bp) protein (213aa)
Marine sediment metagenome DNA, contig: S01H4_C00508 {ECO:0000313|EMBL:GAG73105.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
dystroglycan-type cadherin-like protein
Dystroglycan-type cadherin-like domain repeat protein
MPI_scaffold_487_8

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6307..6414
DNA (108bp) protein (36aa)
Marine sediment metagenome DNA, contig: S06H3_S00691 {ECO:0000313|EMBL:GAI28189.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
MPI_scaffold_487_9

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comp(6675..7007)
DNA (333bp) protein (111aa)
Marine sediment metagenome DNA, contig: S06H3_S00691 {ECO:0000313|EMBL:GAI28191.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Uncharacterized protein
MPI_scaffold_487_10

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7274..8029
DNA (756bp) protein (252aa)
Marine sediment metagenome DNA, contig: S03H2_L07827 {ECO:0000313|EMBL:GAH31732.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Uridine phosphorylase
MPI_scaffold_487_11

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8026..8769
DNA (744bp) protein (248aa)
udp; uridine phosphorylase Udp (EC:2.4.2.3)
Marine sediment metagenome DNA, contig: S12H4_S02101 {ECO:0000313|EMBL:GAI91665.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Uridine phosphorylase Udp
MPI_scaffold_487_12

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8773..10098
DNA (1326bp) protein (442aa)
Marine sediment metagenome DNA, contig: S12H4_S20527 {ECO:0000313|EMBL:GAJ11554.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
amidohydrolase
Amidohydrolase
MPI_scaffold_487_13

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comp(10117..10788)
DNA (672bp) protein (224aa)
Marine sediment metagenome DNA, contig: S01H4_C02571 {ECO:0000313|EMBL:GAG64190.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_487_14
Caldatribacterium saccharofermentans, Caldatribacterium, Atribacteria, Bacteria

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comp(11169..12347)
DNA (1179bp) protein (393aa)
nucleoside-binding protein; K02058 simple sugar transport system substrate-binding protein Tax=Caldatribacterium saccharofermentans
nucleoside-binding protein
Nucleoside-binding protein
MPI_scaffold_487_15

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comp(12587..13516)
DNA (930bp) protein (310aa)
Marine sediment metagenome DNA, contig: S06H3_C00100 {ECO:0000313|EMBL:GAH93345.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
inner-membrane translocator
Inner-membrane translocator
MPI_scaffold_487_16
S_OP1_64_32, KB1, Bacteria

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comp(13519..14598)
DNA (1080bp) protein (360aa)
Nucleoside ABC transporter membrane protein Tax=S_OP1_64_32
nucleoside ABC transporter membrane protein
Nucleoside ABC transporter membrane protein
MPI_scaffold_487_17

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comp(14595..16130)
DNA (1536bp) protein (512aa)
Marine sediment metagenome DNA, contig: S01H1_L00246 {ECO:0000313|EMBL:GAF80653.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
ABC transporter ATP-binding protein
ABC transporter ATP-binding protein
MPI_scaffold_487_18

Not on your lists

comp(16699..18030)
DNA (1332bp) protein (444aa)
Marine sediment metagenome DNA, contig: S03H2_C00398 {ECO:0000313|EMBL:GAH20253.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
putative selenium metabolism protein SsnA
Putative selenium metabolism protein SsnA
MPI_scaffold_487_19
CG_OP9-01, Atribacteria, Bacteria

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comp(18257..19615)
DNA (1359bp) protein (453aa)
cytosine deaminase-like metal-dependent hydrolase Tax=CG_OP9-01
cytosine deaminase-like metal-dependent hydrolase rbh
Cytosine deaminase-like metal-dependent hydrolase
MPI_scaffold_487_20

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comp(19634..20098)
DNA (465bp) protein (155aa)
Marine sediment metagenome DNA, contig: S01H4_C04562 {ECO:0000313|EMBL:GAG54633.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
MPI_scaffold_487_21

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comp(20091..20969)
DNA (879bp) protein (293aa)
Marine sediment metagenome DNA, contig: S01H1_C00800 {ECO:0000313|EMBL:GAF82761.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM-like protein
MPI_scaffold_487_22

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comp(20966..23275)
DNA (2310bp) protein (770aa)
Marine sediment metagenome DNA, contig: S01H4_C00315 {ECO:0000313|EMBL:GAG70406.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
MPI_scaffold_487_23
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

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comp(23291..24505)
DNA (1215bp) protein (405aa)
pyridoxal-5'-phosphate-dependent protein subunit beta
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:AER67454.1}; TaxID=580340 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga.;" source="T
Pyridoxal-5'-phosphate-dependent protein beta subunit
Displaying 23 items

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