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MPI_scaffold_338

Alias: MPI_Nov_34_47_36

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Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_338_1
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

663..2108
DNA (1446bp) protein (482aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=RBG_19FT_COMBO_JS1_35_14_curated
UDP-N-acetylmuramoylalanine/D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] alias=ACD15_13018.53448.16G0046,ACD15_13018.53448.16_46,ACD15_C00039G00046 id=8781 tax=ACD15 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown organism_group=OD1-i organism_desc=OD1-i
UDP-N-acetylmuramoylalanine--D-glutamate ligase
MPI_scaffold_338_2
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(2121..3068)
DNA (948bp) protein (316aa)
hypothetical protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_338_3
unknown

Not on your lists

comp(3111..3476)
DNA (366bp) protein (122aa)
MPI_scaffold_338_4
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(3522..4223)
DNA (702bp) protein (234aa)
integral membrane protein Tax=CG_Dehalo_01
integral membrane protein
Uncharacterized protein
MPI_scaffold_338_5
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4273..4842)
DNA (570bp) protein (190aa)
oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase (EC:1.5.1.34 1.-.-.-); K00540 [EC:1.-.-.-] Tax=RBG_16_Deltaproteobacteria_54_11_curated
oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase (EC:1.5.1.34 1.-.-.-)
Oxygen-insensitive NAD(P)H nitroreductase / dihydropteridine reductase
MPI_scaffold_338_6
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(5012..5884)
DNA (873bp) protein (291aa)
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-); K13292 phosphatidylglycerol:prolipoprotein diacylglycerol transferase [EC:2.-.-.-] Tax=CG_OP9-01
prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase
MPI_scaffold_338_7
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(5928..6926)
DNA (999bp) protein (333aa)
dihydroorotate dehydrogenase family protein; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=GWF2_RBX1_38_17_curated
dihydroorotate dehydrogenase 2
Uncharacterized protein
MPI_scaffold_338_8
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(6965..10519)
DNA (3555bp) protein (1185aa)
pyruvate--ferredoxin (flavodoxin) oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase [EC:1.2.7.-] Tax=RBG_19FT_COMBO_JS1_35_14_curated
pyruvate:ferredoxin oxidoreductase subunit alpha
Pyruvate-flavodoxin oxidoreductase
MPI_scaffold_338_9
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(10558..11442)
DNA (885bp) protein (295aa)
ATP synthase subunit gamma-like protein; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] Tax=RBG_19FT_COMBO_JS1_35_14_curated
ATP synthase subunit gamma-like protein
ATP synthase gamma subunit-like protein
MPI_scaffold_338_10

Not on your lists

comp(11408..12985)
DNA (1578bp) protein (526aa)
Marine sediment metagenome DNA, contig: S01H4_C00034 {ECO:0000313|EMBL:GAG62082.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
atpA2; F0F1 ATP synthase subunit alpha
ATP synthase subunit alpha
MPI_scaffold_338_11

Not on your lists

comp(13007..13825)
DNA (819bp) protein (273aa)
Marine sediment metagenome DNA, contig: S01H4_C00736 {ECO:0000313|EMBL:GAG74524.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
ATP synthase subunit b
MPI_scaffold_338_12

Not on your lists

comp(13836..14105)
DNA (270bp) protein (90aa)
Marine sediment metagenome DNA, contig: S01H4_C00736 {ECO:0000313|EMBL:GAG74523.1}; Marine sediment metagenome DNA, contig: S06H3_C03517 {ECO:0000313|EMBL:GAI08109.1}; Marine sediment metagenome DNA,
atpH-II; ATP synthase c subunit
ATP synthase c subunit
MPI_scaffold_338_13

Not on your lists

comp(14123..14812)
DNA (690bp) protein (230aa)
Marine sediment metagenome DNA, contig: S03H2_C00988 {ECO:0000313|EMBL:GAH27642.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
atpB; F0F1 ATP synthase subunit A
ATP synthase subunit a
MPI_scaffold_338_14

Not on your lists

comp(15109..15444)
DNA (336bp) protein (112aa)
Marine sediment metagenome DNA, contig: S06H3_C02937 {ECO:0000313|EMBL:GAH97793.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Sodium-transporting ATPase subunit I
Putative F0F1 ATP synthase subunit
MPI_scaffold_338_15

Not on your lists

comp(15437..15829)
DNA (393bp) protein (131aa)
Marine sediment metagenome DNA, contig: S01H4_C00461 {ECO:0000313|EMBL:GAG72624.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
alternate F1F0 ATPase, F1 subunit epsilon
Alternate F1F0 ATPase, F1 subunit epsilon
MPI_scaffold_338_16

Not on your lists

comp(15826..17211)
DNA (1386bp) protein (462aa)
Marine sediment metagenome DNA, contig: S01H4_C00461 {ECO:0000313|EMBL:GAG72622.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
atpB2; F0F1 ATP synthase subunit beta
ATP synthase subunit beta
MPI_scaffold_338_17
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17313..18755)
DNA (1443bp) protein (481aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Me
pyruvate kinase
Pyruvate kinase
MPI_scaffold_338_18

Not on your lists

comp(18875..19294)
DNA (420bp) protein (140aa)
Marine sediment metagenome DNA, contig: S01H4_C03374 {ECO:0000313|EMBL:GAG55886.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
phage shock protein C, PspC
Phage shock protein C, PspC
MPI_scaffold_338_19
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(19350..19877)
DNA (528bp) protein (176aa)
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACZ40650.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter
GCN5-related N-acetyltransferase
MPI_scaffold_338_20
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

20169..22043
DNA (1875bp) protein (625aa)
tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme Tax=RBG_19FT_COMBO_JS1_35_14_curated
tRNA uridine 5-carboxymethylaminomethyl modification protein mnmG
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
MPI_scaffold_338_21

Not on your lists

comp(22051..22926)
DNA (876bp) protein (292aa)
Methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Marine sediment metagenome DNA, contig: S01H4_C00050 {ECO:0000313|EMBL:GAG62658.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
UPI00029A56BF related cluster
MPI_scaffold_338_22
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(23143..23670)
DNA (528bp) protein (176aa)
carD family transcriptional regulator; K07736 CarD family transcriptional regulator Tax=CG_OP9-01
CarD family transcriptional regulator
Transcriptional regulator, CarD family
Displaying 22 items

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