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MPI_scaffold_400

Alias: MPI_Nov_34_47_26

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Displaying 26 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_400_1
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(221..1111)
DNA (891bp) protein (297aa)
AraC family transcriptional regulator Tax=RBG_19FT_COMBO_JS1_35_14_curated
Permeases of the drug/metabolite transporter (DMT) superfamily
Uncharacterized protein alias=gwc2_scaffold_77_13 id=5090608 tax=PER_GWC2_33_13 organism_desc=RuBisCO project
MPI_scaffold_400_2
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

1353..2678
DNA (1326bp) protein (442aa)
membrane-bound serine protease; K07403 membrane-bound serine protease (ClpP class) Tax=RBG_19FT_COMBO_JS1_35_14_curated
membrane-bound serine protease
Membrane-bound serine protease
MPI_scaffold_400_3

Not on your lists

2682..3485
DNA (804bp) protein (268aa)
Marine sediment metagenome DNA, contig: S03H2_C02036 {ECO:0000313|EMBL:GAH23478.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
SPFH domain-containing protein
Putative uncharacterized protein alias=gwe2_scaffold_8_264 id=2166737 tax=TA06 species=Deferribacter desulfuricans SSM1 genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres
MPI_scaffold_400_4

Not on your lists

comp(3604..3861)
DNA (258bp) protein (86aa)
Marine sediment metagenome DNA, contig: S12H4_L04000 {ECO:0000313|EMBL:GAI86266.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
elongation factor Tu, domain 2
translation elongation factor-like protein alias=RBG1_1780,RBG1_C00001G01780 id=1251338 tax=RBG1 species=unknown genus=Dehalococcoides taxon_order=unknown taxon_class=Dehalococcoidetes phylum=Chloroflexi
MPI_scaffold_400_5
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


comp(3999..5444)
DNA (1446bp) protein (482aa)
prolyl-tRNA synthetase; K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=RBG_19FT_COMBO_JS1_35_14_curated
proS; Proline--tRNA ligase (EC:6.1.1.15)
Proline--tRNA ligase
MPI_scaffold_400_6

Not on your lists

6006..6428
DNA (423bp) protein (141aa)
Marine sediment metagenome DNA, contig: S01H1_L07885 {ECO:0000313|EMBL:GAF78474.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
MarR family transcriptional regulator
Transcriptional regulator, MarR family
MPI_scaffold_400_7

Not on your lists

6728..7204
DNA (477bp) protein (159aa)
Marine sediment metagenome DNA, contig: S01H4_C02318 {ECO:0000313|EMBL:GAG59724.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component
MPI_scaffold_400_8
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

7227..8393
DNA (1167bp) protein (389aa)
glycine betaine/L-proline ABC transporter ATPase subunit
Glycine betaine/L-proline ABC transporter, ATPase subunit {ECO:0000313|EMBL:ADK80139.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochae
Glycine betaine/L-proline ABC transporter, ATPase subunit
MPI_scaffold_400_9

Not on your lists

8411..9058
DNA (648bp) protein (216aa)
Marine sediment metagenome DNA, contig: S03H2_S00414 {ECO:0000313|EMBL:GAH53332.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
binding-protein-dependent transporters inner membrane component
Binding-protein-dependent transport systems inner membrane component
MPI_scaffold_400_10
Dethiosulfovibrio peptidovorans, Dethiosulfovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

9081..9980
DNA (900bp) protein (300aa)
Substrate-binding region of ABC-type glycine betaine transport system {ECO:0000313|EMBL:EFC91413.1}; Flags: Precursor;; TaxID=469381 species="Bacteria; Synergistetes; Synergistia; Synergistales; Syner
glycine betaine ABC transporter substrate-binding protein
Substrate-binding region of ABC-type glycine betaine transport system
MPI_scaffold_400_11
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(10126..11394)
DNA (1269bp) protein (423aa)
hypothetical protein Tax=CG_OP9-01
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_400_12

Not on your lists

comp(11446..11928)
DNA (483bp) protein (161aa)
maeB; Malic enzyme Malate oxidoreductase MaeB (EC:1.1.1.40)
Marine sediment metagenome DNA, contig: S01H4_C00223 {ECO:0000313|EMBL:GAG68052.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Malic enzyme (Malate oxidoreductase) (MaeB)
MPI_scaffold_400_13

Not on your lists

comp(11877..12056)
DNA (180bp) protein (60aa)
malic enzyme (EC:1.1.1.38)
Marine sediment metagenome DNA, contig: S03H2_L00216 {ECO:0000313|EMBL:GAH29200.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Malate dehydrogenase (Oxaloacetate-decarboxylating)
MPI_scaffold_400_14
CG_Desulfob_01, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12431..13957
DNA (1527bp) protein (509aa)
asparagine synthase; K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] Tax=CG_Desulfob_01
asparagine synthase
Asparagine synthetase
MPI_scaffold_400_15

Not on your lists

14026..14511
DNA (486bp) protein (162aa)
Marine sediment metagenome DNA, contig: S03H2_S25158 {ECO:0000313|EMBL:GAH76821.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
phosphodiesterase
Putative uncharacterized protein
MPI_scaffold_400_16
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(14617..17391)
DNA (2775bp) protein (925aa)
hypothetical protein; K09118 hypothetical protein Tax=CG_OP9-01
hypothetical protein
UPF0182 protein Acear_1298
MPI_scaffold_400_17
CG_Caldi_01, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

Not on your lists

comp(17646..18614)
DNA (969bp) protein (323aa)
putative hydrolase Tax=CG_Caldi_01
hypothetical protein
Peptidase S58 DmpA
MPI_scaffold_400_18
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

comp(18729..19916)
DNA (1188bp) protein (396aa)
receptor family ligand-binding protein Tax=RBG_13_Spirochaetes_68_11_curated
receptor family ligand-binding protein
receptor family ligand-binding protein
MPI_scaffold_400_19

Not on your lists

comp(19987..20532)
DNA (546bp) protein (182aa)
Marine sediment metagenome DNA, contig: S12H4_S09535 {ECO:0000313|EMBL:GAI88136.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Predicted membrane protein
MPI_scaffold_400_20
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(20940..21779)
DNA (840bp) protein (280aa)
putative inner-membrane translocator Tax=RBG_16_Spirochaete_67_19_curated
putative inner-membrane translocator
putative inner-membrane translocator
MPI_scaffold_400_21
unknown

Not on your lists

comp(22075..22188)
DNA (114bp) protein (38aa)
MPI_scaffold_400_22
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

comp(22223..23032)
DNA (810bp) protein (270aa)
putative inner-membrane translocator Tax=RBG_13_Spirochaetes_68_11_curated
putative inner-membrane translocator
putative inner-membrane translocator
MPI_scaffold_400_23
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23128..23856)
DNA (729bp) protein (243aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30); K01996 branched-chain amino acid transport system ATP-binding protein Tax=GWA2_Deltaproteobacteria_45_12_curated
Fe(3+)-transporting ATPase (EC:3.6.3.30)
Fe(3+)-transporting ATPase
MPI_scaffold_400_24
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

comp(23843..24613)
DNA (771bp) protein (257aa)
branched-chain amino acid transport ATP-binding protein LivG Tax=RBG_13_Spirochaetes_68_11_curated
branched-chain amino acid transport ATP-binding protein LivG
Abc transport system ATP-binding protein
MPI_scaffold_400_25
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(24738..26210)
DNA (1473bp) protein (491aa)
pyridoxal-5'-phosphate-dependent protein subunit beta
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:AER67454.1}; TaxID=580340 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga.;" source="T
Pyridoxal-5'-phosphate-dependent protein beta subunit
MPI_scaffold_400_26
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26350..26823)
DNA (474bp) protein (158aa)
Uncharacterized protein {ECO:0000313|EMBL:KDR96731.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale
hypothetical protein
Putative uncharacterized protein
Displaying 26 items

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