ggKbase home page

MPI_scaffold_412

Alias: MPI_Nov_34_47_42

Search features with annotation key words

Displaying 21 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_412_1
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

65..967
DNA (903bp) protein (301aa)
diacylglycerol kinase catalytic subunit; K07029 Tax=CG_OP9-01
diacylglycerol kinase catalytic subunit
Diacylglycerol kinase, catalytic region
MPI_scaffold_412_2
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(992..1942)
DNA (951bp) protein (317aa)
aldo/keto reductase Tax=RBG_19FT_COMBO_JS1_35_14_curated
aldo/keto reductase
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
MPI_scaffold_412_3
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(2055..5087)
DNA (3033bp) protein (1011aa)
PAS/PAC sensor-containing diguanylate cyclase Tax=RBG_19FT_COMBO_JS1_35_14_curated
PAS/PAC sensor signal transduction histidine kinase
PAS/PAC sensor signal transduction histidine kinase
MPI_scaffold_412_4
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(5400..6074)
DNA (675bp) protein (225aa)
Marine sediment metagenome DNA, contig: S01H4_C00269 Tax=CG_OP9-01
MPI_scaffold_412_5

Not on your lists

comp(6112..6633)
DNA (522bp) protein (174aa)
Marine sediment metagenome DNA, contig: S01H1_L05017 {ECO:0000313|EMBL:GAF74425.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
peptidase C56 family protein
Peptidase C56 family protein
MPI_scaffold_412_6

Not on your lists

comp(7006..7554)
DNA (549bp) protein (183aa)
Marine sediment metagenome DNA, contig: S06H3_L03769 {ECO:0000313|EMBL:GAI16703.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Uncharacterized protein
MPI_scaffold_412_7
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7729..8706)
DNA (978bp) protein (326aa)
biotin--(acetyl-COA-carboxylase) synthetase; K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] Tax=RBG_13_Actinobacteria_35_1
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin/acetyl-CoA-carboxylase ligase
MPI_scaffold_412_8

Not on your lists

comp(8792..9430)
DNA (639bp) protein (213aa)
deoxyadenosine kinase (EC:2.7.1.76)
Marine sediment metagenome DNA, contig: S01H4_C00018 {ECO:0000313|EMBL:GAG61377.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Deoxynucleoside kinase
MPI_scaffold_412_9

Not on your lists

comp(9433..10065)
DNA (633bp) protein (211aa)
Marine sediment metagenome DNA, contig: S01H4_C00018 {ECO:0000313|EMBL:GAG61382.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
deoxynucleoside kinase
Deoxynucleoside kinase
MPI_scaffold_412_10
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(10249..11868)
DNA (1620bp) protein (540aa)
carbon starvation protein CstA; K06200 carbon starvation protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
cstA; carbon starvation membrane protein
Carbon starvation protein CstA
MPI_scaffold_412_11

Not on your lists

comp(11974..12510)
DNA (537bp) protein (179aa)
Marine sediment metagenome DNA, contig: S12H4_S10995 {ECO:0000313|EMBL:GAJ07992.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Uncharacterized protein
MPI_scaffold_412_12

Not on your lists

12753..13175
DNA (423bp) protein (141aa)
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39912.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
formylmethanofuran dehydrogenase subunit E-like
Putative uncharacterized protein
MPI_scaffold_412_13
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

Not on your lists

comp(13231..13461)
DNA (231bp) protein (77aa)
hypothetical protein Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
MPI_scaffold_412_14
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13566..14930)
DNA (1365bp) protein (455aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=526986 species="Bacteria; Firmi
fumC; fumarate hydratase, class II (EC:4.2.1.2)
Fumarate hydratase class II
MPI_scaffold_412_15
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15058..16032)
DNA (975bp) protein (325aa)
carbamate kinase (EC:2.7.2.2) Tax=RBG_13_Actinobacteria_35_12_curated
carbamate kinase (EC:2.7.2.2)
Carbamate kinase
MPI_scaffold_412_16
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(16153..16785)
DNA (633bp) protein (211aa)
abortive infection protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
abortive infection protein
Abortive infection protein
MPI_scaffold_412_17

Not on your lists

comp(16854..17645)
DNA (792bp) protein (264aa)
Marine sediment metagenome DNA, contig: S03H2_L03976 {ECO:0000313|EMBL:GAH32335.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Protein containing DUF169
MPI_scaffold_412_18
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

18074..19078
DNA (1005bp) protein (335aa)
ABC transporter binding protein; K02012 iron(III) transport system substrate-binding protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
ABC transporter binding protein
ABC transporter, periplasmic binding protein, thiB subfamily
MPI_scaffold_412_19

Not on your lists

19176..20888
DNA (1713bp) protein (571aa)
Marine sediment metagenome DNA, contig: S01H4_C00069 {ECO:0000313|EMBL:GAG63287.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
binding-protein-dependent transporters inner membrane component
Ferric iron ABC transporter, permease protein
MPI_scaffold_412_20
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

20922..21200
DNA (279bp) protein (93aa)
spermidine/putrescine ABC transporter ATP-binding subunit; K02010 iron(III) transport system ATP-binding protein [EC:3.6.3.30] Tax=RBG_19FT_COMBO_JS1_35_14_curated
polyamine-transporting ATPase (EC:3.6.3.31)
Polyamine-transporting ATPase
MPI_scaffold_412_21

Not on your lists

21241..21387
DNA (147bp) protein (49aa)
Marine sediment metagenome DNA, contig: S12H4_L04378 {ECO:0000313|EMBL:GAI75252.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
ABC transporter-like protein
ABC transporter-like protein
Displaying 21 items

View Taxonomy