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MPI_scaffold_416

Alias: MPI_Nov_34_47_43

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_416_1

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2..538
DNA (537bp) protein (179aa)
formate--tetrahydrofolate ligase (EC:6.3.4.3)
Marine sediment metagenome DNA, contig: S01H4_C01025 {ECO:0000313|EMBL:GAG60724.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Formate--tetrahydrofolate ligase
MPI_scaffold_416_2
CG_OP9-01, Atribacteria, Bacteria

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588..974
DNA (387bp) protein (129aa)
gcvH; glycine cleavage system H protein; K02437 glycine cleavage system H protein Tax=CG_OP9-01
gcvH; glycine cleavage system H protein
Glycine cleavage system H protein
MPI_scaffold_416_3

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996..2339
DNA (1344bp) protein (448aa)
gcvPA; glycine dehydrogenase [decarboxylating] subunit 1 (EC:1.4.4.2)
Marine sediment metagenome DNA, contig: S01H1_C00024 {ECO:0000313|EMBL:GAF70411.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Probable glycine dehydrogenase [decarboxylating] subunit 1
MPI_scaffold_416_4
CG_OP9-01, Atribacteria, Bacteria

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2351..3859
DNA (1509bp) protein (503aa)
gcvPB; glycine dehydrogenase [decarboxylating] subunit 2 (EC:1.4.4.2); K00283 glycine dehydrogenase subunit 2 [EC:1.4.4.2] Tax=CG_OP9-01
gcvPB; glycine dehydrogenase [decarboxylating] subunit 2 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 2
MPI_scaffold_416_5

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3873..4997
DNA (1125bp) protein (375aa)
gcvT; aminomethyltransferase (EC:2.1.2.10)
Marine sediment metagenome DNA, contig: S01H4_L02054 {ECO:0000313|EMBL:GAG63813.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Aminomethyltransferase
MPI_scaffold_416_6
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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5210..6568
DNA (1359bp) protein (453aa)
amino acid carrier protein; K03310 alanine or glycine:cation symporter, AGCS family Tax=RBG_13_Actinobacteria_35_12_curated
amino acid carrier protein
Amino acid carrier protein
MPI_scaffold_416_7
CG_OP9-01, Atribacteria, Bacteria

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6648..7763
DNA (1116bp) protein (372aa)
ald; alanine dehydrogenase (EC:1.4.1.1); K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=CG_OP9-01
alanine dehydrogenase
Alanine dehydrogenase
MPI_scaffold_416_8
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(7883..9523)
DNA (1641bp) protein (547aa)
chaperonin GroEL; K04077 chaperonin GroEL Tax=RBG_19FT_COMBO_JS1_35_14_curated
chaperonin GroEL
60 kDa chaperonin
MPI_scaffold_416_9
CG_OP9-01, Atribacteria, Bacteria

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comp(9593..9895)
DNA (303bp) protein (101aa)
chaperonin Cpn10; K04078 chaperonin GroES Tax=CG_OP9-01
groS; chaperonin, 10 kDa
10 kDa chaperonin
MPI_scaffold_416_10
CG_OP9-01, Atribacteria, Bacteria

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comp(10097..11122)
DNA (1026bp) protein (342aa)
gcp; O-sialoglycoprotein endopeptidase Gcp (EC:3.4.24.57) Tax=CG_OP9-01
gcp; O-sialoglycoprotein endopeptidase Gcp (EC:3.4.24.57)
YgjD/Kae1/Qri7 family, required for threonylcarbamoyladenosine (T(6)A) formation in tRNA
MPI_scaffold_416_11
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(11123..11836)
DNA (714bp) protein (238aa)
hypothetical protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
hypothetical protein
Suspect SCG annotation. See neighboring gene [MPI_scaffold_416_10].
UPI00019B04E7 related cluster
MPI_scaffold_416_12

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comp(11817..12329)
DNA (513bp) protein (171aa)
Marine sediment metagenome DNA, contig: S03H2_C01919 {ECO:0000313|EMBL:GAH22168.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_416_13
CG_OP9-01, Atribacteria, Bacteria

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comp(12310..13542)
DNA (1233bp) protein (411aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] Tax=CG_OP9-01
alr; alanine racemase (EC:5.1.1.1)
Alanine racemase
MPI_scaffold_416_14

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comp(13828..14205)
DNA (378bp) protein (126aa)
Holo-(acyl-carrier-protein) synthase (EC:2.7.8.7)
Marine sediment metagenome DNA, contig: S03H2_S13339 {ECO:0000313|EMBL:GAH70822.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Uncharacterized protein
MPI_scaffold_416_15
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(14274..16100)
DNA (1827bp) protein (609aa)
glutamine--fructose-6-phosphate transaminase; K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] Tax=RBG_19FT_COMBO_JS1_35_14_curated
glucosamine/fructose-6-phosphate aminotransferase
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
MPI_scaffold_416_16
CG_OP9-01, Atribacteria, Bacteria

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comp(16558..17907)
DNA (1350bp) protein (450aa)
glmM; phosphoglucosamine mutase (EC:5.4.2.10); K03431 phosphoglucosamine mutase [EC:5.4.2.10] Tax=CG_OP9-01
phosphoglucosamine mutase
Phosphoglucosamine mutase
MPI_scaffold_416_17
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(17924..19129)
DNA (1206bp) protein (402aa)
YbbR family protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
hypothetical protein
YbbR family protein
MPI_scaffold_416_18
CG_OP9-01, Atribacteria, Bacteria

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comp(19122..19937)
DNA (816bp) protein (272aa)
hypothetical protein Tax=CG_OP9-01
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_416_19

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comp(20082..20474)
DNA (393bp) protein (131aa)
Marine sediment metagenome DNA, contig: S03H2_C01797 {ECO:0000313|EMBL:GAH20862.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
SSU ribosomal protein S9P
30S ribosomal protein S9
MPI_scaffold_416_20

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comp(20495..20932)
DNA (438bp) protein (146aa)
Marine sediment metagenome DNA, contig: S01H1_S36460 {ECO:0000313|EMBL:GAG53534.1}; Marine sediment metagenome DNA, contig: S01H4_S16097 {ECO:0000313|EMBL:GAH12090.1}; TaxID=412755 species="unclassifi
50S ribosomal protein L13
50S ribosomal protein L13
MPI_scaffold_416_21
unknown

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comp(21070..21138)
DNA (69bp) protein (23aa)
Displaying 21 items

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