ggKbase home page

MPI_scaffold_616

Alias: MPI_Nov_34_47_39

Search features with annotation key words

Displaying 26 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_616_1
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(444..1232)
DNA (789bp) protein (263aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEE97476.1}; Flags: Precursor;; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sed
Uncharacterized protein
MPI_scaffold_616_2
R_WOR_2_46_37, WOR-2, Bacteria

Not on your lists

comp(2034..2606)
DNA (573bp) protein (191aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_46_37_curated
MPI_scaffold_616_3

Not on your lists

comp(3121..3852)
DNA (732bp) protein (244aa)
Marine sediment metagenome DNA, contig: S01H4_S14979 {ECO:0000313|EMBL:GAH14275.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
MPI_scaffold_616_4
CG_Magasa_01, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3879..4280)
DNA (402bp) protein (134aa)
IS30 family transposase Tax=CG_Magasa_01
Integrase catalytic region
lbf:LBF_2982 IS30 family transposase alias=ACD63_C00025G00001,ACD63_99308.24237.9G0001,ACD63_99308.24237.9_1 id=95996 tax=ACD63 species=Leptospira biflexa genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_group=OD1, not OD1-i organism_desc=OD1
MPI_scaffold_616_5
R_OD1_Uhrbacteria_46_25, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4333..4779)
DNA (447bp) protein (149aa)
IS30 family transposase Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_46_25_curated
insI; IS30 transposase
lbf:LBF_2982 IS30 family transposase alias=ACD63_C00025G00001,ACD63_99308.24237.9G0001,ACD63_99308.24237.9_1 id=95996 tax=ACD63 species=Leptospira biflexa genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes organism_group=OD1, not OD1-i organism_desc=OD1
MPI_scaffold_616_6

Not on your lists

comp(4890..5138)
DNA (249bp) protein (83aa)
Marine sediment metagenome DNA, contig: S12H4_S07115 {ECO:0000313|EMBL:GAI89155.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_616_7

Not on your lists

comp(5412..5966)
DNA (555bp) protein (185aa)
Marine sediment metagenome DNA, contig: S12H4_C03221 {ECO:0000313|EMBL:GAI64757.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_616_8
RBG_13_OP11_40_15_curated, Microgenomates, Bacteria

Not on your lists

comp(6075..6713)
DNA (639bp) protein (213aa)
phage integrase; K03733 integrase/recombinase XerC Tax=RBG_13_OP11_40_15_curated
Possible integrase
MPI_scaffold_616_9
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6887..7294)
DNA (408bp) protein (136aa)
biopolymer transport protein ExbD/TolR; K03559 biopolymer transport protein ExbD Tax=RBG_13_Actinobacteria_35_12_curated
biopolymer transport protein ExbD/TolR
Biopolymer transport protein ExbD/TolR
MPI_scaffold_616_10
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(7275..7904)
DNA (630bp) protein (210aa)
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB Tax=RBG_19FT_COMBO_JS1_35_14_curated
MotA/TolQ/ExbB proton channel
MotA/TolQ/ExbB proton channel
MPI_scaffold_616_11
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(7923..8816)
DNA (894bp) protein (298aa)
TonB family protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
TonB family protein
TonB family protein
MPI_scaffold_616_12
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(8886..10775)
DNA (1890bp) protein (630aa)
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
TonB-dependent receptor rbh
TonB-dependent receptor
MPI_scaffold_616_13
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(11237..11617)
DNA (381bp) protein (127aa)
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein Tax=CG_OP9-01
periplasmic binding protein
Periplasmic binding protein
MPI_scaffold_616_14
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12005..12688)
DNA (684bp) protein (228aa)
ferrous iron transporter FeoB
Ferrous iron transporter FeoB {ECO:0000313|EMBL:AFM27572.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomo
Ferrous iron transporter FeoB
MPI_scaffold_616_15
Desulfovibrio aespoeensis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12685..12927)
DNA (243bp) protein (81aa)
FeoA family protein
FeoA family protein {ECO:0000313|EMBL:ADU62899.1}; TaxID=643562 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio
FeoA family protein
MPI_scaffold_616_16
Halanaerobium praevalens, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12944..13195)
DNA (252bp) protein (84aa)
FeoA family protein
FeoA family protein {ECO:0000313|EMBL:ADO76325.1}; TaxID=572479 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium praevalens (strain
FeoA family protein
MPI_scaffold_616_17
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13256..15082)
DNA (1827bp) protein (609aa)
Ferrous iron transport protein B {ECO:0000313|EMBL:EFK09062.1}; TaxID=88274 species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
ferrous iron transport protein B
Ferrous iron transport protein B
MPI_scaffold_616_18
Halanaerobium praevalens, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15203..16048)
DNA (846bp) protein (282aa)
nickel transport complex transmembrane protein NikM
Nickel transport complex, NikM subunit, transmembrane {ECO:0000313|EMBL:ADO76324.1}; Flags: Precursor;; TaxID=572479 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halan
Nickel transport complex, NikM subunit, transmembrane
MPI_scaffold_616_19
Halanaerobium praevalens, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16045..16614)
DNA (570bp) protein (190aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO76323.1}; Flags: Precursor;; TaxID=572479 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerob
Uncharacterized protein
MPI_scaffold_616_20
unknown

Not on your lists

comp(16823..17008)
DNA (186bp) protein (62aa)
MPI_scaffold_616_21
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

Not on your lists

comp(17267..17716)
DNA (450bp) protein (150aa)
MntR family transcriptional regulator
Transcriptional regulator, MntR family {ECO:0000313|EMBL:BAI80752.1}; TaxID=639282 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Deferribacter.;" source="Deferribacter des
Transcriptional regulator, MntR family
MPI_scaffold_616_22
Hippea maritima, Hippea, Desulfurellales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17851..19083)
DNA (1233bp) protein (411aa)
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEA34430.1}; TaxID=760142 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfurellales; Desulfurellaceae; Hippea.;" source="Hippea mari
Major facilitator superfamily MFS_1
MPI_scaffold_616_23
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19257..19985)
DNA (729bp) protein (243aa)
Zinc/iron permease {ECO:0000313|EMBL:AKH98036.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum sulfuri
zinc/iron permease
Zinc/iron permease
MPI_scaffold_616_24

Not on your lists

comp(19985..20320)
DNA (336bp) protein (112aa)
Marine sediment metagenome DNA, contig: S06H3_L03718 {ECO:0000313|EMBL:GAI16288.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
UPI0002035719 related cluster
MPI_scaffold_616_25
unknown

Not on your lists

comp(20398..20529)
DNA (132bp) protein (44aa)
MPI_scaffold_616_26
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(20882..22384)
DNA (1503bp) protein (501aa)
methyltransferase (EC:2.1.1.-)
putative with similarity to BchE, but NOT Mg-protoporphyrin monomethyl ester cyclase (anaerobic) Tax=RBG_19FT_COMBO_JS1_35_14_curated
ppd:Ppro_1456 radical SAM domain-containing protein alias=RAAC39_AAC7_scaffold_55_44,RAAC39_C00003G00044 id=717649 tax=RAAC39 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes
Displaying 26 items

View Taxonomy