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MPI_scaffold_113_11

Organism: MPI_OP9-like_34_59_partial

partial RP 10 / 55 BSCG 12 / 51 MC: 2 ASCG 5 / 38
Location: comp(10574..11146)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_Actinobacteria_35_12_curated UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 186.0
  • Bit_score: 158
  • Evalue 1.30e-35
RNA polymerase subunit sigma-24 KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 188.0
  • Bit_score: 146
  • Evalue 7.70e-33
RNA polymerase sigma-24 factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 146
  • Evalue 1.10e-32

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Taxonomy

RBG_13_Actinobacteria_35_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGAATAACAATAAGGATGATTGGTCTATAGTACAGAGTTGTTTGGATGGTAACAGGGAAGCTTACGCCCGTCTGGTAGAGAAATACGAAAAGCCAGTTTTTAATATTGTTTACCGGCTGACCGGCGGTTCTAAGGATACCAAAGATCTTACCCAGGAGGCTTTTTTAAAAGCCTATAATTCTCTCGGGCAGGTCAGGCCGGAATTTAAGTTTTCCAACTGGTTGTTTAAAATTGCCACAAATCTCTGTAAAGATCAACTGAAAAAAAGGGAAATAACAACGGTTTCTTTAAATGAGCTGAATTCTCTTGCAGACTATAAGGCTAGCCAGGAGAATCCAGATAGTTTGTCACCTTACGAAGAGAAATTTATACCCAGCGATGAGCAGGAACAGGTCCAAAGGGCAATTAGTAAGTTGCCGTTAAAGTATCGCAGGGTTGTTGTTTTAAGGTACATTCAGGACTTACCTTATAAAGAAATAGCTGGTATCTTAGAGATGCCCATAGGTCGGGTTAAGGTTCAACTCCACCGGGCGCACAAAATTCTCTATGAAGAACTTTCTGAAGTCCTGTAG
PROTEIN sequence
Length: 191
MNNNKDDWSIVQSCLDGNREAYARLVEKYEKPVFNIVYRLTGGSKDTKDLTQEAFLKAYNSLGQVRPEFKFSNWLFKIATNLCKDQLKKREITTVSLNELNSLADYKASQENPDSLSPYEEKFIPSDEQEQVQRAISKLPLKYRRVVVLRYIQDLPYKEIAGILEMPIGRVKVQLHRAHKILYEELSEVL*