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MPI_scaffold_113

Alias: MPI_Nov_34_47_339

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_113_1

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comp(111..335)
DNA (225bp) protein (75aa)
Marine sediment metagenome DNA, contig: S03H2_S05161 {ECO:0000313|EMBL:GAH48072.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_113_2
bacterium UASB270, Bacteria

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549..932
DNA (384bp) protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK55976.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_113_3
unknown

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1729..1956
DNA (228bp) protein (76aa)
MPI_scaffold_113_4

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2216..2974
DNA (759bp) protein (253aa)
Marine sediment metagenome DNA, contig: S01H4_C00621 {ECO:0000313|EMBL:GAG73875.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
transcriptional regulator
Transcriptional regulator
MPI_scaffold_113_5
CG_OP9-01, Atribacteria, Bacteria

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3022..4440
DNA (1419bp) protein (473aa)
radical SAM domain iron-sulfur cluster-binding oxidoreductase Tax=CG_OP9-01
radical SAM domain-containing iron-sulfur cluster-binding oxidoreductase
Radical SAM domain iron-sulfur cluster-binding oxidoreductase
MPI_scaffold_113_6
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

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4744..6129
DNA (1386bp) protein (462aa)
Mg-protoporphyrin IX monomethyl ester oxidative cyclase-related protein; K04034 anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase [EC:4.-.-.-] Tax=RBG_16_Zixibacteria_43_9_curated
radical SAM protein
Radical SAM domain protein
MPI_scaffold_113_7
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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comp(6156..6959)
DNA (804bp) protein (268aa)
hypothetical protein Tax=RBG_13_Actinobacteria_35_12_curated
hypothetical protein
Tetratricopeptide TPR_2 repeat-containing protein
MPI_scaffold_113_8
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(6989..8602)
DNA (1614bp) protein (538aa)
hypothetical protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
pega domain protein
PEGA domain protein
MPI_scaffold_113_9
CG_Micra_01, Micraarchaeota, Archaea

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comp(8689..9672)
DNA (984bp) protein (328aa)
hypothetical protein Tax=CG_Micra_01
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_113_10
BJP_IG2102_Syntrophobacterales_60_12, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9754..10548)
DNA (795bp) protein (265aa)
hypothetical protein
Putative uncharacterized protein
Tax=BJP_IG2102_Syntrophobacterales_60_12
MPI_scaffold_113_11
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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comp(10574..11146)
DNA (573bp) protein (191aa)
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_Actinobacteria_35_12_curated
RNA polymerase subunit sigma-24
RNA polymerase sigma-24 factor
MPI_scaffold_113_12

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comp(11417..12667)
DNA (1251bp) protein (417aa)
Marine sediment metagenome DNA, contig: S01H4_L00585 {ECO:0000313|EMBL:GAG61707.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Uncharacterized protein
MPI_scaffold_113_13

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comp(13291..14187)
DNA (897bp) protein (299aa)
Marine sediment metagenome DNA, contig: S01H4_C00059 {ECO:0000313|EMBL:GAG62941.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
cation efflux system protein
Cation efflux system protein
MPI_scaffold_113_14
Peregrinibacteria bacterium GW2011_GWE2_39_6, Peregrinibacteria, Bacteria

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comp(14422..15588)
DNA (1167bp) protein (389aa)
Major facilitator transporter {ECO:0000313|EMBL:KKR26371.1}; TaxID=1619064 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWE2_39_6.;"
MFS transporter family protein
major facilitator transporter alias=gwf2_scaffold_2732_3 id=5097583 tax=PER_GWF2_39_17 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_desc=RuBisCO project
MPI_scaffold_113_15

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comp(15911..17269)
DNA (1359bp) protein (453aa)
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=292451 species="Bacteria; candidate division JS1; environmental samples.;" source="uncultured candidate division JS1 bacterium.;"
magnesium transporter mgtE
Mg/Co/Ni transporter MgtE
MPI_scaffold_113_16

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comp(17605..19008)
DNA (1404bp) protein (468aa)
Marine sediment metagenome DNA, contig: S01H4_C00555 {ECO:0000313|EMBL:GAG73484.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
metal dependent phosphohydrolase
Putative uncharacterized protein
MPI_scaffold_113_17

Not on your lists

comp(19708..20409)
DNA (702bp) protein (234aa)
Marine sediment metagenome DNA, contig: S06H3_S21574 {ECO:0000313|EMBL:GAI50442.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
SigF
DNA-directed RNA polymerase specialized sigma subunit
MPI_scaffold_113_18
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(20680..21129)
DNA (450bp) protein (150aa)
DtxR family iron (metal) dependent repressor
Iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:AEG17784.1}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;"
Iron (Metal) dependent repressor, DtxR family
MPI_scaffold_113_19
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(21347..23041)
DNA (1695bp) protein (565aa)
sensory box protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
signal peptide protein
PAS domain S-box
MPI_scaffold_113_20
RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(23442..26105)
DNA (2664bp) protein (888aa)
HD-GYP domain-containing protein Tax=RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_113_21
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

Not on your lists

comp(26335..26625)
DNA (291bp) protein (97aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
Hypothetical membrane protein
MPI_scaffold_113_22
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

26775..27830
DNA (1056bp) protein (352aa)
PEGA domain protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
PEGA domain protein
PEGA domain protein
MPI_scaffold_113_23
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(27913..28605)
DNA (693bp) protein (231aa)
hypothetical protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
hypothetical protein
Putative secreted protein
MPI_scaffold_113_24
R_Elusimicrobia_64_13, Elusimicrobia, Bacteria

Not on your lists

comp(29031..29711)
DNA (681bp) protein (227aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_64_13_curated
hypothetical protein
Hypothetical membrane protein
MPI_scaffold_113_25
CG_OP9-01, Atribacteria, Bacteria

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comp(29947..34293)
DNA (4347bp) protein (1449aa)
hypothetical protein Tax=CG_OP9-01
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_113_26
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(34570..35271)
DNA (702bp) protein (234aa)
abortive infection protein
Abortive infection protein
Tax=BJP_08E140C01_Spirochaeta_53_29
MPI_scaffold_113_27
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(35903..36562)
DNA (660bp) protein (220aa)
sensory box protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
PAS/PAC sensor signal transduction histidine kinase
Putative PAS/PAC sensor protein
Displaying 27 items

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