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MPI_scaffold_543

Alias: MPI_Clostridia_35_44_plus_6

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Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_543_1
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(102..1181)
DNA (1080bp) protein (360aa)
PpiC-type peptidyl-prolyl cis-trans isomerase Tax=RBG_13_Actinobacteria_35_12_curated
PpiC-type peptidyl-prolyl cis-trans isomerase
PpiC-type peptidyl-prolyl cis-trans isomerase
MPI_scaffold_543_2
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

1371..3389
DNA (2019bp) protein (673aa)
Lig; NAD-dependent DNA ligase; K01972 DNA ligase (NAD+) [EC:6.5.1.2] Tax=RBG_19FT_COMBO_JS1_35_14_curated
DNA ligase
DNA ligase
MPI_scaffold_543_3
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

3420..3713
DNA (294bp) protein (98aa)
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] Tax=RBG_19FT_COMBO_JS1_35_14_curated
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit C
UPI000288043D related cluster
MPI_scaffold_543_4
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

3770..5230
DNA (1461bp) protein (487aa)
aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:3.5.1.4); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=CG_OP9-01
glutamyl-tRNA(Gln) amidotransferase subunit A
Glutamyl-tRNA(Gln) amidotransferase subunit A
MPI_scaffold_543_5
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

5343..6812
DNA (1470bp) protein (490aa)
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-); K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=CG_OP9-01
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
MPI_scaffold_543_6

Not on your lists

6853..7032
DNA (180bp) protein (60aa)
Marine sediment metagenome DNA, contig: S03H2_S00942 {ECO:0000313|EMBL:GAH59593.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Rubredoxin-type Fe(Cys)4 protein
Rubredoxin
MPI_scaffold_543_7
CG_Dehalo_01, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

7035..8213
DNA (1179bp) protein (393aa)
flavoprotein (EC:1.-.-.-)
flavodoxin/nitric oxide synthase Tax=CG_Dehalo_01
Beta-lactamase domain protein
MPI_scaffold_543_8
unknown

Not on your lists

8373..8870
DNA (498bp) protein (166aa)
MPI_scaffold_543_9
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

8988..10661
DNA (1674bp) protein (558aa)
hypothetical protein Tax=CG_OP9-01
hypothetical protein
Putative uncharacterized protein alias=gwe2_scaffold_515_21 id=2070159 tax=TA06 species=Microscilla marina ATCC 23134 genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes
MPI_scaffold_543_10
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(10744..11337)
DNA (594bp) protein (198aa)
hypothetical protein Tax=CG_OP9-01
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_543_11
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11340..12068)
DNA (729bp) protein (243aa)
hypothetical protein Tax=RBG_13_Actinobacteria_35_12_curated
hypothetical protein
Uncharacterized protein
MPI_scaffold_543_12
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12317..12817
DNA (501bp) protein (167aa)
Rossmann fold nucleotide-binding protein
Rossmann fold nucleotide-binding protein {ECO:0000313|EMBL:ACV62325.1}; TaxID=485916 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomacu
Rossmann fold nucleotide-binding protein
MPI_scaffold_543_13
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

12844..14493
DNA (1650bp) protein (550aa)
putative dehydrogenase Tax=RBG_13_Actinobacteria_35_12_curated
putative dehydrogenase
Putative dehydrogenase
MPI_scaffold_543_14

Not on your lists

comp(14553..15497)
DNA (945bp) protein (315aa)
Marine sediment metagenome DNA, contig: S12H4_L01796 {ECO:0000313|EMBL:GAI76096.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hflC; membrane protease subunit HflC
Membrane protease subunit HflC
MPI_scaffold_543_15
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(15461..16468)
DNA (1008bp) protein (336aa)
HflK protein; K04088 membrane protease subunit HflK [EC:3.4.-.-] Tax=RBG_13_Actinobacteria_35_12_curated
HflK protein
HflK protein
MPI_scaffold_543_16
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

16797..17639
DNA (843bp) protein (281aa)
fructose-1,6-bisphosphate aldolase, class II (EC:4.1.2.40); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] Tax=RBG_19FT_COMBO_JS1_35_14_curated
fba; fructose-1,6-bisphosphate aldolase (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II
MPI_scaffold_543_17
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

17682..18713
DNA (1032bp) protein (344aa)
putative 6-phosphofructokinase (EC:2.7.1.-); K00850 6-phosphofructokinase [EC:2.7.1.11] Tax=CG_OP9-01
putative 6-phosphofructokinase (EC:2.7.1.-)
6-phosphofructokinase
MPI_scaffold_543_18
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

18894..22373
DNA (3480bp) protein (1160aa)
dnaE; DNA polymerase III DnaE (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] Tax=CG_OP9-01
dnaE; DNA polymerase III DnaE (EC:2.7.7.7)
DNA polymerase III, alpha subunit
MPI_scaffold_543_19
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

22649..25330
DNA (2682bp) protein (894aa)
DNA polymerase I; K02335 DNA polymerase I [EC:2.7.7.7] Tax=RBG_19FT_COMBO_JS1_35_14_curated
polA; DNA polymerase I (EC:2.7.7.7)
DNA polymerase
MPI_scaffold_543_20

Not on your lists

25377..25991
DNA (615bp) protein (205aa)
dephospho-CoA kinase (EC:2.7.1.24)
Marine sediment metagenome DNA, contig: S12H4_L01323 {ECO:0000313|EMBL:GAI86524.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Dephospho-CoA kinase
MPI_scaffold_543_21
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

26321..28312
DNA (1992bp) protein (664aa)
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=RBG_19FT_COMBO_JS1_35_14_curated
excinuclease ABC subunit B
UvrABC system protein B
MPI_scaffold_543_22
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

28510..31392
DNA (2883bp) protein (961aa)
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A Tax=RBG_19FT_COMBO_JS1_35_14_curated
uvrA; excinuclease ABC (subunit A)
UvrABC system protein A
MPI_scaffold_543_23
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

31383..32438
DNA (1056bp) protein (352aa)
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C Tax=RBG_19FT_COMBO_JS1_35_14_curated
excinuclease ABC subunit C
Excinuclease ABC C subunit domain protein
Displaying 23 items

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