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MPI_scaffold_31

Alias: MPI_Clostridia_35_44_plus_2

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Displaying items 1-30 of 51 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_31_1
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(153..782)
DNA (630bp) protein (210aa)
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CDF57946.1}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Th
glycosyl transferase family 2 protein
Glycosyltransferases involved in cell wall biogenesis
MPI_scaffold_31_2
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(898..1989)
DNA (1092bp) protein (364aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] Tax=CG_OP9-01
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
MPI_scaffold_31_3

Not on your lists

comp(2006..3076)
DNA (1071bp) protein (357aa)
Marine sediment metagenome DNA, contig: S01H4_C00128 {ECO:0000313|EMBL:GAG65266.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
putative membrane-associated zinc metalloprotease
Putative membrane-associated zinc metalloprotease
MPI_scaffold_31_4
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(3121..4287)
DNA (1167bp) protein (389aa)
Dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] Tax=CG_OP9-01
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase
MPI_scaffold_31_5

Not on your lists

comp(4336..5148)
DNA (813bp) protein (271aa)
Marine sediment metagenome DNA, contig: S01H1_C00393 {ECO:0000313|EMBL:GAF76642.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
phosphatidate cytidylyltransferase
Phosphatidate cytidylyltransferase
MPI_scaffold_31_6
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(5132..5872)
DNA (741bp) protein (247aa)
undecaprenyl diphosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] Tax=CG_OP9-01
uppS; undecaprenyl diphosphate synthase
Isoprenyl transferase
MPI_scaffold_31_7

Not on your lists

comp(6038..6598)
DNA (561bp) protein (187aa)
Marine sediment metagenome DNA, contig: S01H4_C01973 {ECO:0000313|EMBL:GAG74219.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
ribosome recycling factor
Ribosome-recycling factor
MPI_scaffold_31_8
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(6598..7323)
DNA (726bp) protein (242aa)
pyrH; uridylate kinase (EC:2.7.4.-); K09903 uridylate kinase [EC:2.7.4.22] Tax=CG_OP9-01
pyrH; uridylate kinase (EC:2.7.4.-)
Uridylate kinase
MPI_scaffold_31_9
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(7338..7937)
DNA (600bp) protein (200aa)
translation elongation factor Ts Tax=RBG_19FT_COMBO_JS1_35_14_curated
tsf; elongation factor Ts
Elongation factor Ts
MPI_scaffold_31_10

Not on your lists


comp(7991..8710)
DNA (720bp) protein (240aa)
Marine sediment metagenome DNA, contig: S01H4_L06326 {ECO:0000313|EMBL:GAG76706.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
30S ribosomal protein S2
30S ribosomal protein S2
MPI_scaffold_31_11
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(8913..10343)
DNA (1431bp) protein (477aa)
ATP-dependent hsl protease ATP-binding subunit hslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU Tax=RBG_19FT_COMBO_JS1_35_14_curated
heat shock protein HslVU, ATPase subunit HslU
ATP-dependent protease ATPase subunit HslU
MPI_scaffold_31_12
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(10357..10959)
DNA (603bp) protein (201aa)
ATP-dependent protease hslV; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] Tax=CG_OP9-01
20S proteasome A and B subunits
ATP-dependent protease subunit HslV
MPI_scaffold_31_13
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(11052..11978)
DNA (927bp) protein (309aa)
tyrosine recombinase XerC; K03733 integrase/recombinase XerC Tax=RBG_19FT_COMBO_JS1_35_14_curated
tyrosine recombinase XerC
Tyrosine recombinase XerC
MPI_scaffold_31_14
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(11971..14073)
DNA (2103bp) protein (701aa)
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RBG_19FT_COMBO_JS1_35_14_curated
topA; DNA topoisomerase I
DNA topoisomerase
MPI_scaffold_31_15

Not on your lists

comp(14118..14711)
DNA (594bp) protein (198aa)
Marine sediment metagenome DNA, contig: S01H4_L07202 {ECO:0000313|EMBL:GAG87389.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
acyl-phosphate glycerol 3-phosphate acyltransferase
Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY
MPI_scaffold_31_16
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(14726..16072)
DNA (1347bp) protein (449aa)
engA; GTP-binding protein EngA; K03977 GTP-binding protein Tax=CG_OP9-01
small GTP-binding protein
GTPase Der
MPI_scaffold_31_17
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(16382..17044)
DNA (663bp) protein (221aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=CG_OP9-01
ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase
MPI_scaffold_31_18
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(17087..18631)
DNA (1545bp) protein (515aa)
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
Mg chelatase-related protein
Mg chelatase-related protein
MPI_scaffold_31_19
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18652..19005)
DNA (354bp) protein (118aa)
UPF0102 protein IO99_09930 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
Endonuclease
MPI_scaffold_31_20

Not on your lists

comp(18998..19753)
DNA (756bp) protein (252aa)
Marine sediment metagenome DNA, contig: S03H2_C00730 {ECO:0000313|EMBL:GAH24253.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rnhB; ribonuclease HII
Ribonuclease HII
MPI_scaffold_31_21
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists


comp(19791..20123)
DNA (333bp) protein (111aa)
hypothetical protein; K02884 large subunit ribosomal protein L19 Tax=RBG_19FT_COMBO_JS1_35_14_curated
rplS; ribosomal protein L19
50S ribosomal protein L19
MPI_scaffold_31_22
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(20124..20885)
DNA (762bp) protein (254aa)
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=CG_OP9-01
tRNA (Guanine37-N(1)-) methyltransferase (EC:2.1.1.31)
tRNA (Guanine37-N1)-methyltransferase
MPI_scaffold_31_23
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20927..21199)
DNA (273bp) protein (91aa)
UPF0109 protein T472_0203370 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 2
nucleic acid binding protein
UPI000287F7EB related cluster
MPI_scaffold_31_24
CG_OP9-01, Atribacteria, Bacteria

Not on your lists


comp(21196..21456)
DNA (261bp) protein (87aa)
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=CG_OP9-01
30S ribosomal protein S16
30S ribosomal protein S16
MPI_scaffold_31_25
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(21507..22835)
DNA (1329bp) protein (443aa)
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pep
signal recognition particle protein
Signal recognition particle protein
MPI_scaffold_31_26

Not on your lists

comp(23218..24114)
DNA (897bp) protein (299aa)
Marine sediment metagenome DNA, contig: S01H1_C00164 {ECO:0000313|EMBL:GAF72956.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
signal recognition particle-docking protein FtsY
Signal recognition particle receptor FtsY
MPI_scaffold_31_27
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(24131..27733)
DNA (3603bp) protein (1201aa)
chromosome segregation protein SMC; K03529 chromosome segregation protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
chromosome segregation protein SMC
Chromosome partition protein Smc
MPI_scaffold_31_28
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(27748..28464)
DNA (717bp) protein (239aa)
RNAse III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=RBG_19FT_COMBO_JS1_35_14_curated
ribonuclease III (EC:3.1.26.3)
Ribonuclease 3
MPI_scaffold_31_29
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(28500..28730)
DNA (231bp) protein (77aa)
acyl carrier protein; K02078 acyl carrier protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
acyl carrier protein
Acyl carrier protein
MPI_scaffold_31_30
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(28777..29334)
DNA (558bp) protein (186aa)
hypothetical protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
fatty acid biosynthesis transcriptional regulator
Transcription factor fapR
Displaying items 1-30 of 51 in total

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