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MPI_scaffold_78

Alias: MPI_Clostridia_35_44_plus_4

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Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_78_1

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comp(112..1023)
DNA (912bp) protein (304aa)
Marine sediment metagenome DNA, contig: S01H1_L08207 {ECO:0000313|EMBL:GAF88926.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
dihydrodipicolinate synthase/N-acetylneuraminate lyase
Uncharacterized protein
MPI_scaffold_78_2

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1287..2270
DNA (984bp) protein (328aa)
fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III (EC:2.3.1.41) rbh
Marine sediment metagenome DNA, contig: S01H4_C00011 {ECO:0000313|EMBL:GAG61075.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
3-oxoacyl-[acyl-carrier-protein] synthase 3
MPI_scaffold_78_3
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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2282..3238
DNA (957bp) protein (319aa)
oxidoreductase, 2-nitropropane dioxygenase family; K02371 enoyl-[acyl carrier protein] reductase II [EC:1.3.1.-] Tax=RBG_19FT_COMBO_JS1_35_14_curated
2-nitropropane dioxygenase
2-nitropropane dioxygenase, NPD
MPI_scaffold_78_4
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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3267..4202
DNA (936bp) protein (312aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" s
fabD; malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
malonyl CoA-acyl carrier protein transacylase
MPI_scaffold_78_5
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4205..4954
DNA (750bp) protein (250aa)
fabG; 3-ketoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:KAJ53056.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.
3-oxoacyl-(Acyl-carrier-protein) reductase
MPI_scaffold_78_6

Not on your lists

4969..6219
DNA (1251bp) protein (417aa)
fabF; 3-oxoacyl-ACP synthase (EC:2.3.1.41)
Marine sediment metagenome DNA, contig: S01H4_C00011 {ECO:0000313|EMBL:GAG61065.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
3-oxoacyl-[acyl-carrier-protein] synthase 2
MPI_scaffold_78_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6221..6649
DNA (429bp) protein (143aa)
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase (EC:4.2.1.-)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000255|HAMAP-Rule:MF_00406}; EC=4.2.1.59 {ECO:0000255|HAMAP-Rule:MF_00406};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ
MPI_scaffold_78_8

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6684..7781
DNA (1098bp) protein (366aa)
Marine sediment metagenome DNA, contig: S01H1_L02163 {ECO:0000313|EMBL:GAF71236.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
oxidoreductase, 2-nitropropane dioxygenase family
Oxidoreductase, 2-nitropropane dioxygenase family
MPI_scaffold_78_9
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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8229..9512
DNA (1284bp) protein (428aa)
putative efflux protein, MATE family Tax=RBG_19FT_COMBO_JS1_35_14_curated
putative efflux protein, MATE family
Multi antimicrobial extrusion protein (Na(+)/drug antiporter)
MPI_scaffold_78_10
CG_OP9-01, Atribacteria, Bacteria

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9622..10218
DNA (597bp) protein (199aa)
putative domain HDIG-containing protein Tax=CG_OP9-01
putative domain HDIG-containing protein
Putative domain HDIG-containing protein
MPI_scaffold_78_11
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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10211..10867
DNA (657bp) protein (219aa)
lipolytic protein G-D-S-L family Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
G-D-S-L family lipolytic protein
G-D-S-L family lipolytic protein
MPI_scaffold_78_12
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

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10896..11627
DNA (732bp) protein (244aa)
TIGR02453 family protein Tax=RBG_13_Aminicenantes_59_9_curated
TIGR02453 family protein
TIGR02453 family protein
MPI_scaffold_78_13
RHI_Planctomycetes_42_15, Planctomycetes, Bacteria

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11691..12521
DNA (831bp) protein (277aa)
hypothetical protein; K05810 conserved hypothetical protein Tax=RIFCSPHIGHO2_12_Planctomycetes_42_15_curated
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_78_14
CG_OP9-01, Atribacteria, Bacteria

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12636..14141
DNA (1506bp) protein (502aa)
putative with similarity to BchE, but NOT Mg-protoporphyrin monomethyl ester cyclase (anaerobic) Tax=CG_OP9-01
Fe-S oxidoreductase
ppd:Ppro_1456 radical SAM domain-containing protein alias=RAAC39_AAC7_scaffold_55_44,RAAC39_C00003G00044 id=717649 tax=RAAC39 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes
MPI_scaffold_78_15
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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14381..15637
DNA (1257bp) protein (419aa)
histidyl-tRNA synthetase/ATP phosphoribosyltransferase, regulatory subunit Tax=RBG_13_Actinobacteria_35_12_curated
histidyl-tRNA synthetase/ATP phosphoribosyltransferase, regulatory subunit
Histidine--tRNA ligase
MPI_scaffold_78_16
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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15624..16316
DNA (693bp) protein (231aa)
hisG; ATP phosphoribosyltransferase; K00765 ATP phosphoribosyltransferase [EC:2.4.2.17] Tax=RBG_13_Actinobacteria_35_12_curated
hisG; ATP phosphoribosyltransferase HisG (EC:2.4.2.17)
ATP phosphoribosyltransferase
MPI_scaffold_78_17
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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16344..17642
DNA (1299bp) protein (433aa)
hisD; histidinol dehydrogenase HisD (EC:1.1.1.23) Tax=RBG_19FT_COMBO_JS1_35_14_curated
histidinol dehydrogenase
Histidinol dehydrogenase
MPI_scaffold_78_18
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

17670..18701
DNA (1032bp) protein (344aa)
haloacid dehalogenase domain-containing protein hydrolase Tax=RBG_19FT_COMBO_JS1_35_14_curated
HAD superfamily (subfamily IA) hydrolase, TIGR01548
HAD superfamily (Subfamily IA) hydrolase, TIGR01548
MPI_scaffold_78_19
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

18707..19306
DNA (600bp) protein (200aa)
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19); K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] Tax=CG_OP9-01
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase
MPI_scaffold_78_20
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

19322..19960
DNA (639bp) protein (213aa)
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; K02501 glutamine amidotransferase [EC:2.4.2.-] Tax=RBG_19FT_COMBO_JS1_35_14_curated
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
Imidazole glycerol phosphate synthase subunit HisH
MPI_scaffold_78_21
Peptococcaceae bacterium BRH_c4a, Clostridiales, Clostridia, Firmicutes, Bacteria

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19938..20666
DNA (729bp) protein (243aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
MPI_scaffold_78_22

Not on your lists

20680..21444
DNA (765bp) protein (255aa)
Marine sediment metagenome DNA, contig: S12H4_L01770 {ECO:0000313|EMBL:GAI75737.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Imidazole glycerol phosphate synthase cyclase subunit
Imidazole glycerol phosphate synthase subunit HisF
MPI_scaffold_78_23
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

21448..22104
DNA (657bp) protein (219aa)
Phosphoribosyl-ATP pyrophosphatase (EC:3.5.4.19 3.6.1.31)
phosphoribosyl-ATP pyrophosphohydrolase Tax=RBG_19FT_COMBO_JS1_35_14_curated
Phosphoribosyl-ATP pyrophosphatase
MPI_scaffold_78_24
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

22128..23222
DNA (1095bp) protein (365aa)
Histidinol-phosphate aminotransferase Tax=S_Thermoanaerobacterales_50_218
histidinol-phosphate aminotransferase
Histidinol-phosphate aminotransferase
MPI_scaffold_78_25
CG_OP9-01, Atribacteria, Bacteria

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comp(23217..24110)
DNA (894bp) protein (298aa)
methylenetetrahydrofolate reductase Tax=CG_OP9-01
MetF; 5,10-methylenetetrahydrofolate reductase
Methylenetetrahydrofolate reductase
MPI_scaffold_78_26

Not on your lists

24683..25315
DNA (633bp) protein (211aa)
Marine sediment metagenome DNA, contig: S12H4_C02450 {ECO:0000313|EMBL:GAI71391.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
methyltransferase cognate corrinoid protein
Methyltransferase cognate corrinoid protein
MPI_scaffold_78_27

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25396..26202
DNA (807bp) protein (269aa)
Marine sediment metagenome DNA, contig: S01H1_L04433 {ECO:0000313|EMBL:GAF67422.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
dihydropteroate synthase DHPS
Dihydropteroate synthase DHPS
MPI_scaffold_78_28
CG_OP9-01, Atribacteria, Bacteria

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26321..27490
DNA (1170bp) protein (390aa)
hypothetical protein Tax=CG_OP9-01
hypothetical protein
UPI0001E2E747 related cluster
MPI_scaffold_78_29

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27527..27934
DNA (408bp) protein (136aa)
Marine sediment metagenome DNA, contig: S12H4_C00649 {ECO:0000313|EMBL:GAI67245.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
methionine ABC transporter
4Fe-4S ferredoxin, iron-sulfur binding domain protein
MPI_scaffold_78_30

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27947..28711
DNA (765bp) protein (255aa)
Marine sediment metagenome DNA, contig: S01H4_C02191 {ECO:0000313|EMBL:GAG57818.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
ApbE family lipoprotein
ApbE family lipoprotein
Displaying items 1-30 of 41 in total

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