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MPI_scaffold_180

Alias: MPI_Clostridia_35_44_plus_7

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_180_1

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comp(1..183)
DNA (183bp) protein (61aa)
Marine sediment metagenome DNA, contig: S01H4_C00244 {ECO:0000313|EMBL:GAG68591.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Transglycosylase, SLT family
MPI_scaffold_180_2
CG_OP9-01, Atribacteria, Bacteria

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comp(991..1989)
DNA (999bp) protein (333aa)
isocitrate/isopropylmalate dehydrogenase; K00030 isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] Tax=CG_OP9-01
isocitrate dehydrogenase (EC:1.1.1.41) rbh
Isocitrate dehydrogenase (NAD(+))
MPI_scaffold_180_3
Caldicellulosiruptor saccharolyticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2013..3953)
DNA (1941bp) protein (647aa)
aconitate hydratase
Putative aconitate hydratase {ECO:0000313|EMBL:ABP66369.1}; TaxID=351627 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicell
Aconitate hydratase
MPI_scaffold_180_4
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(4121..5536)
DNA (1416bp) protein (472aa)
pyruvate carboxyltransferase Tax=CG_OP9-01
pyruvate carboxyltransferase
Pyruvate carboxyltransferase
MPI_scaffold_180_5
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(5596..6897)
DNA (1302bp) protein (434aa)
glutamate dehydrogenase; K00260 glutamate dehydrogenase [EC:1.4.1.2] Tax=CG_OP9-01
glutamate dehydrogenase (EC:1.4.1.2 1.4.1.3)
Glutamate dehydrogenase
MPI_scaffold_180_6
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(7275..7970)
DNA (696bp) protein (232aa)
antitermination regulatory protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
antitermination regulatory protein
Predicted antitermination regulatory protein, ANTAR and GAF domain
MPI_scaffold_180_7
Lysinibacillus manganicus, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(8580..10142)
DNA (1563bp) protein (521aa)
AMP-dependent synthetase {ECO:0000313|EMBL:KGR77893.1}; TaxID=1384049 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus manganicus DSM 26584.;"
long-chain-fatty-acid--CoA ligase
Putative uncharacterized protein
MPI_scaffold_180_8

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comp(10424..11017)
DNA (594bp) protein (198aa)
Marine sediment metagenome DNA, contig: S06H3_S12348 {ECO:0000313|EMBL:GAI45352.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
drug/metabolite transporter, EamA family
Drug/metabolite transporter, EamA family
MPI_scaffold_180_9

Not on your lists

comp(11046..12485)
DNA (1440bp) protein (480aa)
glutamate synthase (EC:1.4.1.13)
Marine sediment metagenome DNA, contig: S01H1_C00469 {ECO:0000313|EMBL:GAF77812.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Glutamate synthase (NADPH), homotetrameric
MPI_scaffold_180_10
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12485..13342)
DNA (858bp) protein (286aa)
ferredoxin-NADP(+) reductase subunit alpha (EC:1.97.-.-); K00528 ferredoxin--NADP+ reductase [EC:1.18.1.2] Tax=RBG_13_Actinobacteria_35_12_curated
oxidoreductase FAD/NAD(P)-binding domain-containing protein
Oxidoreductase FAD/NAD(P)-binding domain protein
MPI_scaffold_180_11
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(13358..14695)
DNA (1338bp) protein (446aa)
ackA; acetate kinase AckA (EC:2.7.2.1) Tax=RBG_19FT_COMBO_JS1_35_14_curated
ackA; acetate kinase AckA (EC:2.7.2.1)
Acetate kinase
MPI_scaffold_180_12

Not on your lists

comp(15048..16223)
DNA (1176bp) protein (392aa)
Marine sediment metagenome DNA, contig: S03H2_L00216 {ECO:0000313|EMBL:GAH29200.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
malic enzyme
Malic enzyme
MPI_scaffold_180_13
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(16268..16822)
DNA (555bp) protein (185aa)
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2); K01678 fumarate hydratase subunit beta [EC:4.2.1.2] Tax=RBG_13_Actinobacteria_35_12_curated
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha (EC:4.2.1.2)
Fumarate hydratase class I, aerobic
MPI_scaffold_180_14
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(16839..17684)
DNA (846bp) protein (282aa)
fumA; Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit (EC:4.2.1.2) Tax=CG_OP9-01
fumarase subunit alpha (EC:4.2.1.2)
Fumarase alpha subunit
MPI_scaffold_180_15
Streptococcus equi, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17899..18105)
DNA (207bp) protein (69aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIA68104.1}; TaxID=1403449 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus equi subsp. zooep
Uncharacterized protein
MPI_scaffold_180_16
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18199..18888)
DNA (690bp) protein (230aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL00211.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM
Putative uncharacterized protein
MPI_scaffold_180_17
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18952..20946)
DNA (1995bp) protein (665aa)
bssF; hypothetical protein
BssF: conserved uncharacterized protein {ECO:0000313|EMBL:CCK78307.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" sour
BssF: conserved uncharacterized protein
MPI_scaffold_180_18
Peptococcaceae bacterium BRH_c4a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20964..21818)
DNA (855bp) protein (285aa)
Molecular chaperone {ECO:0000313|EMBL:KJS01644.1}; TaxID=1629716 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4a.;"
ATPase
Chaperone (AssE1)
MPI_scaffold_180_19
Peptococcaceae bacterium BRH_c23, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21876..23177)
DNA (1302bp) protein (434aa)
Uncharacterized protein {ECO:0000313|EMBL:KJS46714.1}; TaxID=1629714 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c23.;"
TRAP transporter, DctM subunit
TRAP dicarboxylate transporter, DctM subunit
MPI_scaffold_180_20
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23304..23888)
DNA (585bp) protein (195aa)
TRAP-type C4-dicarboxylate transport system, small permease component
TRAP-type C4-dicarboxylate transport system, small permease component {ECO:0000313|EMBL:AGL00249.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomac
Tripartite ATP-independent periplasmic transporter DctQ component
MPI_scaffold_180_21
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23918..24949)
DNA (1032bp) protein (344aa)
TRAP-type C4-dicarboxylate transport system, periplasmic component
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:AGL00248.1}; Flags: Precursor;; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcace
Extracellular solute-binding protein, family 7
MPI_scaffold_180_22
unknown

Not on your lists

comp(25501..25692)
DNA (192bp) protein (64aa)
MPI_scaffold_180_23
unknown

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comp(25732..25950)
DNA (219bp) protein (73aa)
MPI_scaffold_180_24

Not on your lists

comp(26064..28535)
DNA (2472bp) protein (824aa)
hbsA; hydroxybenzylsuccinate synthase subunit alpha (EC:4.1.99.11)
BssA {ECO:0000313|EMBL:AIB50976.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
HbsA: hydroxybenzylsuccinate synthase, alpha subunit
MPI_scaffold_180_25
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28595..28768)
DNA (174bp) protein (58aa)
BssC/TutF protein
BssC/TutF protein {ECO:0000313|EMBL:AGL00213.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM 7213.
Benzylsuccinate synthase gamma subunit
MPI_scaffold_180_26
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28876..29826)
DNA (951bp) protein (317aa)
glycyl-radical enzyme activator family protein
Glycyl-radical enzyme activator family protein {ECO:0000313|EMBL:AGL00208.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfo
Glycyl-radical enzyme activating protein family
MPI_scaffold_180_27
Brevibacillus sp. BC25, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29998..30759)
DNA (762bp) protein (254aa)
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EJL31406.1}; TaxID=1144308 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. BC25.;"
Transcriptional regulator
Displaying 27 items

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