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MPI_scaffold_361

Alias: MPI_Clostridia_35_44_plus_11

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Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_361_1
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(62..736)
DNA (675bp) protein (225aa)
ribonucleoside-triphosphate reductase-like protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
ribonucleoside-triphosphate reductase-like protein
Putative uncharacterized protein
MPI_scaffold_361_2

Not on your lists

comp(774..1034)
DNA (261bp) protein (87aa)
Marine sediment metagenome DNA, contig: S01H1_S01783 {ECO:0000313|EMBL:GAF88239.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
MPI_scaffold_361_3
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1063..3474)
DNA (2412bp) protein (804aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:GAB61669.1}; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomyc
ribonucleoside-triphosphate reductase class III catalytic subunit
Anaerobic ribonucleoside-triphosphate reductase
MPI_scaffold_361_4

Not on your lists

comp(3494..3961)
DNA (468bp) protein (156aa)
Marine sediment metagenome DNA, contig: S01H4_C01471 {ECO:0000313|EMBL:GAG69516.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
NrdR family transcriptional regulator
Transcriptional repressor NrdR
MPI_scaffold_361_5
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(4234..5175)
DNA (942bp) protein (314aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RBG_19FT_COMBO_JS1_35_14_curated
FtsZ; cell division protein FtsZ
Cell division protein FtsZ
MPI_scaffold_361_6
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(5213..6445)
DNA (1233bp) protein (411aa)
cell division protein FtsA; K03590 cell division protein FtsA Tax=RBG_19FT_COMBO_JS1_35_14_curated
cell division protein FtsA
Cell division protein ftsA
MPI_scaffold_361_7

Not on your lists

comp(6521..7360)
DNA (840bp) protein (280aa)
Marine sediment metagenome DNA, contig: S01H1_C00454 {ECO:0000313|EMBL:GAF77581.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Polypeptide-transport-associated domain protein FtsQ-type
Polypeptide-transport-associated domain protein FtsQ-type
MPI_scaffold_361_8
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(7350..8276)
DNA (927bp) protein (309aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RBG_19FT_COMBO_JS1_35_14_curated
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase
MPI_scaffold_361_9
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(8276..9730)
DNA (1455bp) protein (485aa)
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8); K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RBG_19FT_COMBO_JS1_35_14_curated
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase
MPI_scaffold_361_10
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(9769..10887)
DNA (1119bp) protein (373aa)
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] alias=RBG1_396,RBG1_C00001G00396 id=1249954 tax=RBG1 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undeca
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
MPI_scaffold_361_11

Not on your lists

comp(10891..12012)
DNA (1122bp) protein (374aa)
Marine sediment metagenome DNA, contig: S01H1_C00018 {ECO:0000313|EMBL:GAF70286.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
stage V sporulation protein E
Stage V sporulation protein E
MPI_scaffold_361_12
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(12064..13023)
DNA (960bp) protein (320aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] Tax=RBG_19FT_COMBO_JS1_35_14_curated
phospho-N-acetylmuramoyl-pentapeptide-transferase
Phospho-N-acetylmuramoyl-pentapeptide-transferase
MPI_scaffold_361_13
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(13016..14461)
DNA (1446bp) protein (482aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10); K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] Tax=RBG_19FT_COMBO_JS1_35_14_curated
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
MPI_scaffold_361_14
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(14462..15967)
DNA (1506bp) protein (502aa)
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13); K01928 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] Tax=RBG_19FT_COMBO_JS1_35_1
UDP-N-acetylmuramyl tripeptide synthetase
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
MPI_scaffold_361_15

Not on your lists

comp(16047..17729)
DNA (1683bp) protein (561aa)
stage V sporulation protein D (EC:2.4.1.129)
Marine sediment metagenome DNA, contig: S01H1_C00068 {ECO:0000313|EMBL:GAF71230.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Stage V sporulation protein D
MPI_scaffold_361_16

Not on your lists

comp(17766..18209)
DNA (444bp) protein (148aa)
Marine sediment metagenome DNA, contig: S01H4_L04970 {ECO:0000313|EMBL:GAG89970.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Septum formation initiator
Cell division protein FtsL
MPI_scaffold_361_17
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(18206..19141)
DNA (936bp) protein (312aa)
ribosomal RNA small subunit methyltransferase H; K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] Tax=RBG_19FT_COMBO_JS1_35_14_curated
S-adenosyl-methyltransferase MraW
Ribosomal RNA small subunit methyltransferase H
MPI_scaffold_361_18
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

Not on your lists

comp(19141..19584)
DNA (444bp) protein (148aa)
MraZ protein; K03925 MraZ protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
cell division protein MraZ
Protein MraZ
MPI_scaffold_361_19
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

comp(20255..20971)
DNA (717bp) protein (239aa)
hypothetical protein; K07164 Tax=CG_OP9-01
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_361_20

Not on your lists

comp(21345..22379)
DNA (1035bp) protein (345aa)
Marine sediment metagenome DNA, contig: S01H4_C00579 {ECO:0000313|EMBL:GAG73629.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
radical SAM enzyme, Cfr family
Probable dual-specificity RNA methyltransferase RlmN
MPI_scaffold_361_21

Not on your lists

comp(22380..23315)
DNA (936bp) protein (312aa)
Marine sediment metagenome DNA, contig: S01H4_C00402 {ECO:0000313|EMBL:GAG71869.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
MPI_scaffold_361_22

Not on your lists

comp(23439..24140)
DNA (702bp) protein (234aa)
Marine sediment metagenome DNA, contig: S01H4_C00738 {ECO:0000313|EMBL:GAG74531.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
alanine racemase domain protein
Alanine racemase domain protein
MPI_scaffold_361_23
unknown

Not on your lists

comp(24333..24767)
DNA (435bp) protein (145aa)
MPI_scaffold_361_24
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24894..25094)
DNA (201bp) protein (67aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHM56100.1}; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium acidaminophilum DSM 39
MPI_scaffold_361_25
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

25373..26881
DNA (1509bp) protein (503aa)
Xylulokinase (EC:2.7.1.17); K00854 xylulokinase [EC:2.7.1.17] Tax=RBG_13_Planctomycetes_62_9_curated
Carbohydrate kinase, FGGY
Pentulose/hexulose kinase
Displaying 25 items

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