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MPI_scaffold_622

Alias: MPI_Clostridia_35_44_plus_24

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_622_1
CG_OP9-01, Atribacteria, Bacteria

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94..2295
DNA (2202bp) protein (734aa)
cell division protein FtsK/SpoIIIE; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family Tax=CG_OP9-01
DNA translocase FtsK
Cell division protein FtsK/SpoIIIE
MPI_scaffold_622_2
CG_OP9-01, Atribacteria, Bacteria

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2502..3557
DNA (1056bp) protein (352aa)
basic membrane protein family protein; K07335 basic membrane protein A and related proteins Tax=CG_OP9-01
basic membrane protein family protein
Nucleoside-binding protein
MPI_scaffold_622_3
CG_OP9-01, Atribacteria, Bacteria

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3852..5369
DNA (1518bp) protein (506aa)
ABC transporter-like protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] Tax=CG_OP9-01
ABC transporter
ABC transporter related
MPI_scaffold_622_4

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5438..6565
DNA (1128bp) protein (376aa)
Marine sediment metagenome DNA, contig: S01H1_L02560 {ECO:0000313|EMBL:GAF77351.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
ABC sugar transporter inner membrane subunit
ABC sugar transporter, inner membrane subunit
MPI_scaffold_622_5
CG_OP9-01, Atribacteria, Bacteria

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6565..7509
DNA (945bp) protein (315aa)
sugar ABC transporter permease; K02057 simple sugar transport system permease protein Tax=CG_OP9-01
sugar ABC transporter permease
Sugar ABC transporter, permease protein
MPI_scaffold_622_6

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7555..8430
DNA (876bp) protein (292aa)
Marine sediment metagenome DNA, contig: S06H3_C02607 {ECO:0000313|EMBL:GAH94063.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Uncharacterized protein
MPI_scaffold_622_7
CG_OP9-01, Atribacteria, Bacteria

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8433..8990
DNA (558bp) protein (186aa)
GTP-binding protein Tax=CG_OP9-01
hypothetical protein
GTP-binding protein
MPI_scaffold_622_8
CG_OP9-01, Atribacteria, Bacteria

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9171..9605
DNA (435bp) protein (145aa)
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] Tax=CG_OP9-01
2'-5' RNA ligase
2'-5' RNA ligase
MPI_scaffold_622_9
CG_OP9-01, Atribacteria, Bacteria

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9745..10806
DNA (1062bp) protein (354aa)
recA; recombinase A; K03553 recombination protein RecA Tax=CG_OP9-01
recA; protein RecA
Protein RecA
MPI_scaffold_622_10

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10796..11428
DNA (633bp) protein (211aa)
Marine sediment metagenome DNA, contig: S01H1_L07191 {ECO:0000313|EMBL:GAF68869.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
Regulatory protein RecX
MPI_scaffold_622_11
CG_OP9-01, Atribacteria, Bacteria

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11739..13280
DNA (1542bp) protein (514aa)
2,3 cyclic-nucleotide 2-phosphodiesterase; K06950 uncharacterized protein Tax=CG_OP9-01
metal dependent phosphohydrolase
Ribonuclease Y
MPI_scaffold_622_12
CG_OP9-01, Atribacteria, Bacteria

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13452..14804
DNA (1353bp) protein (451aa)
miaB; tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB (EC:2.8.4.3)
(dimethylallyl)adenosine tRNA methylthiotransferase MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA Tax=CG_OP9-01
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
MPI_scaffold_622_13
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

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14788..15753
DNA (966bp) protein (322aa)
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RBG_13_Actinobacteria_35_12_curated
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
tRNA dimethylallyltransferase
MPI_scaffold_622_14
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16030..16470)
DNA (441bp) protein (147aa)
Uncharacterized protein {ECO:0000313|EMBL:EOA53896.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
metal-dependent hydrolase
Uncharacterized protein
MPI_scaffold_622_15
unknown

Not on your lists

comp(16478..16597)
DNA (120bp) protein (40aa)
Displaying 15 items

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