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MPI_scaffold_1468

Alias: MPI_Clostridia_35_44_plus_26

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_1468_1
CG_OP9-01, Atribacteria, Bacteria

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comp(229..1698)
DNA (1470bp) protein (490aa)
Fis family sigma-54 specific transcriptional regulator Tax=CG_OP9-01
Fis family sigma-54 specific transcriptional regulator
Sigma54 specific transcriptional regulator, Fis family
MPI_scaffold_1468_2
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(1695..3428)
DNA (1734bp) protein (578aa)
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) Tax=RBG_19FT_COMBO_JS1_35_14_curated
DNA repair protein RecN
DNA repair protein RecN
MPI_scaffold_1468_3

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comp(3478..4350)
DNA (873bp) protein (291aa)
Marine sediment metagenome DNA, contig: S01H4_C00151 {ECO:0000313|EMBL:GAG65931.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
ATP-NAD/AcoX kinase
Probable inorganic polyphosphate/ATP-NAD kinase
MPI_scaffold_1468_4
CG_OP9-01, Atribacteria, Bacteria

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comp(4362..4904)
DNA (543bp) protein (181aa)
hypothetical protein Tax=CG_OP9-01
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_1468_5
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4944..5762)
DNA (819bp) protein (273aa)
RNA binding methyltransferase FtsJ like {ECO:0000313|EMBL:CCJ34582.1}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator austral
hemolysin A
RNA binding methyltransferase FtsJ like
MPI_scaffold_1468_6

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comp(5790..6395)
DNA (606bp) protein (202aa)
Marine sediment metagenome DNA, contig: S01H4_C02425 {ECO:0000313|EMBL:GAG61566.1}; Marine sediment metagenome DNA, contig: S03H2_C00221 {ECO:0000313|EMBL:GAH29108.1}; TaxID=412755 species="unclassifi
Lipoprotein LpqB, GerMN domain-containing protein
Lipoprotein LpqB, GerMN domain protein
MPI_scaffold_1468_7

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comp(6408..7937)
DNA (1530bp) protein (510aa)
Marine sediment metagenome DNA, contig: S01H4_C00002 {ECO:0000313|EMBL:GAG60583.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
N-acetylmuramoyl-L-alanine amidase, family 3
N-acetylmuramoyl-L-alanine amidase, family 3
MPI_scaffold_1468_8

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comp(7934..8980)
DNA (1047bp) protein (349aa)
Marine sediment metagenome DNA, contig: S01H4_C00002 {ECO:0000313|EMBL:GAG60587.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_1468_9
unknown

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9104..9526
DNA (423bp) protein (141aa)
MPI_scaffold_1468_10

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comp(9448..9735)
DNA (288bp) protein (96aa)
Marine sediment metagenome DNA, contig: S12H4_S08839 {ECO:0000313|EMBL:GAI93278.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
SsrA-binding protein
smpB; SsrA-binding protein; K03664 SsrA-binding protein alias=RBG1_724,RBG1_C00001G00724 id=1250282 tax=RBG1 species=Candidatus Desulforudis audaxviator genus=Candidatus Desulforudis taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes
MPI_scaffold_1468_11
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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comp(9851..10867)
DNA (1017bp) protein (339aa)
YrdC/Sua5 protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RBG_19FT_COMBO_JS1_35_14_curated
Sua5/YciO/YrdC/YwlC family protein
YrdC/Sua5 family protein, required for threonylcarbamoyladenosine (T(6)A) formation in tRNA
MPI_scaffold_1468_12
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11425..12834)
DNA (1410bp) protein (470aa)
Putative amidohydrolase family protein {ECO:0000313|EMBL:CCX86531.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmenta
amidohydrolase
Putative amidohydrolase family protein
MPI_scaffold_1468_13
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12857..14797)
DNA (1941bp) protein (647aa)
TRAP transporter, 4TM/12TM fusion protein
TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:ABR50773.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus met
TRAP transporter, 4TM/12TM fusion protein
MPI_scaffold_1468_14

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comp(14894..15865)
DNA (972bp) protein (324aa)
Marine sediment metagenome DNA, contig: S12H4_C02750 {ECO:0000313|EMBL:GAI59828.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
TRAP transporter, solute receptor (TAXI family protein)
TRAP transporter, solute receptor (TAXI family protein)
MPI_scaffold_1468_15

Not on your lists

comp(15994..16314)
DNA (321bp) protein (107aa)
Marine sediment metagenome DNA, contig: S12H4_S05536 {ECO:0000313|EMBL:GAJ00799.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
lysine 2,3-aminomutase YodO family protein
Lysine 2,3-aminomutase YodO family protein
Displaying 15 items

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