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MPI_scaffold_171

Alias: MPI_Novel_34_17_partial_1

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_171_1
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

2..1057
DNA (1056bp) protein (352aa)
Tfp pilus assembly protein PilF Tax=RBG_13_Actinobacteria_35_12_curated
hypothetical protein
Uncharacterized protein
MPI_scaffold_171_2

Not on your lists

1942..2367
DNA (426bp) protein (142aa)
Marine sediment metagenome DNA, contig: S01H4_S12993 {ECO:0000313|EMBL:GAH01358.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_171_3
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

2482..3783
DNA (1302bp) protein (434aa)
outer membrane assembly lipoprotein YfiO Tax=CG_OP9-01
hypothetical protein
TPR repeat protein
MPI_scaffold_171_4
RBG_13_Actinobacteria_35_12_curated, Actinobacteria, Bacteria

Not on your lists

3992..4555
DNA (564bp) protein (188aa)
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_Actinobacteria_35_12_curated
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily alias=RBG1_1704,RBG1_C00001G01704 id=1251262 tax=RBG1 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes
MPI_scaffold_171_5

Not on your lists

4628..4993
DNA (366bp) protein (122aa)
Marine sediment metagenome DNA, contig: S01H4_C02931 {ECO:0000313|EMBL:GAG70222.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_171_6

Not on your lists

5131..5793
DNA (663bp) protein (221aa)
putative glycosyl hydrolase, family 13 (EC:2.4.1.-)
Marine sediment metagenome DNA, contig: S12H4_S03093 {ECO:0000313|EMBL:GAJ02118.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Putative Glycosyl hydrolase, family 13
MPI_scaffold_171_7
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

5902..6873
DNA (972bp) protein (324aa)
Putative uncharacterized protein Tax=CG_OP9-01
Putative uncharacterized protein
MPI_scaffold_171_8
unknown

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7943..8914
DNA (972bp) protein (324aa)
MPI_scaffold_171_9

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9421..10101
DNA (681bp) protein (227aa)
Marine sediment metagenome DNA, contig: S01H4_C01769 {ECO:0000313|EMBL:GAG73107.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
PKD domain-containing protein alias=ACD11_C00038G00014,ACD11_2948.35811.26G0014,ACD11_2948.35811.26_14 id=3407 tax=ACD11 species=Psychromonas ingrahamii genus=Psychromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
MPI_scaffold_171_10

Not on your lists

10140..11207
DNA (1068bp) protein (356aa)
Marine sediment metagenome DNA, contig: S12H4_C04530 {ECO:0000313|EMBL:GAI64084.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
outer membrane protein
Outer membrane protein
MPI_scaffold_171_11
CG_OP9-01, Atribacteria, Bacteria

Not on your lists

11316..11822
DNA (507bp) protein (169aa)
Marine sediment metagenome DNA, contig: S01H4_C01704 Tax=CG_OP9-01
MPI_scaffold_171_12

Not on your lists

11888..14008
DNA (2121bp) protein (707aa)
Marine sediment metagenome DNA, contig: S01H4_C00413 {ECO:0000313|EMBL:GAG72019.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
O-antigen polymerase
O-antigen polymerase
MPI_scaffold_171_13

Not on your lists

14261..15490
DNA (1230bp) protein (410aa)
Marine sediment metagenome DNA, contig: S01H4_L00521 {ECO:0000313|EMBL:GAG60482.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Lipopolysaccharide biosynthesis protein
Lipopolysaccharide biosynthesis protein
MPI_scaffold_171_14

Not on your lists

15663..16472
DNA (810bp) protein (270aa)
Marine sediment metagenome DNA, contig: S01H4_C00327 {ECO:0000313|EMBL:GAG70605.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
MPI_scaffold_171_15

Not on your lists

16494..18269
DNA (1776bp) protein (592aa)
Marine sediment metagenome DNA, contig: S01H4_C00327 {ECO:0000313|EMBL:GAG70600.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
phosphoglucomutase/phosphomannomutase
Phosphomannomutase
MPI_scaffold_171_16

Not on your lists

18289..18681
DNA (393bp) protein (131aa)
sulfate adenylyltransferase (EC:2.7.7.4)
Marine sediment metagenome DNA, contig: S03H2_S21367 {ECO:0000313|EMBL:GAH77850.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Sulfate adenylyltransferase
MPI_scaffold_171_17
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18678..19802
DNA (1125bp) protein (375aa)
sulphate transporter
Sulphate transporter {ECO:0000313|EMBL:CCJ35435.1}; TaxID=1201294 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus bo
Sulphate transporter
MPI_scaffold_171_18

Not on your lists

20190..20837
DNA (648bp) protein (216aa)
Marine sediment metagenome DNA, contig: S01H4_S16579 {ECO:0000313|EMBL:GAH16845.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
MarR family transcriptional regulator
Transcriptional regulator, MarR family
MPI_scaffold_171_19

Not on your lists

21091..21312
DNA (222bp) protein (74aa)
Marine sediment metagenome DNA, contig: S01H4_C02596 {ECO:0000313|EMBL:GAG64652.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
MPI_scaffold_171_20

Not on your lists

21309..21626
DNA (318bp) protein (106aa)
Marine sediment metagenome DNA, contig: S01H4_C02596 {ECO:0000313|EMBL:GAG64658.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
mRNA interferase
MPI_scaffold_171_21
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

22315..23616
DNA (1302bp) protein (434aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RBG_13_Nitrospirae_39_12_curated
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose 6-dehydrogenase
MPI_scaffold_171_22
Microcystis sp. T1-4, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

24211..24828
DNA (618bp) protein (206aa)
Uncharacterized protein {ECO:0000313|EMBL:CCI32782.1}; TaxID=1160279 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis sp. T1-4.;"
FkbM family methyltransferase
Uncharacterized protein
MPI_scaffold_171_23
RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24958..26496
DNA (1539bp) protein (513aa)
membrane protein Tax=RBG_19FT_COMBO_Deltaproteobacteria_43_11_curated
hypothetical protein
Membrane protein involved in the export of O-antigen and teichoic acid-like protein
MPI_scaffold_171_24
Oscillatoriales cyanobacterium JSC-12, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

26564..27256
DNA (693bp) protein (231aa)
Dimethyladenosine transferase (RRNA methylation) {ECO:0000313|EMBL:EKQ67387.1}; TaxID=864702 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales.;" source="Oscillatoriales cyanoba
hypothetical protein
Dimethyladenosine transferase (RRNA methylation)
MPI_scaffold_171_25

Not on your lists

27274..28152
DNA (879bp) protein (293aa)
Marine sediment metagenome DNA, contig: S01H4_S21631 {ECO:0000313|EMBL:GAH14229.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
putative methyltransferase
Putative methyltransferase
MPI_scaffold_171_26
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

28211..28534
DNA (324bp) protein (108aa)
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
gmd; GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
GDP-mannose 4,6-dehydratase
MPI_scaffold_171_27
unknown

Not on your lists

28479..28652
DNA (174bp) protein (58aa)
MPI_scaffold_171_28
BJP_08E140C01_Elusimicrobia_64_11, Elusimicrobia lineage IV, Elusimicrobia, Bacteria

Not on your lists

28597..29481
DNA (885bp) protein (295aa)
Glycosyltransferases involved in cell wall biogenesis-like protein
Glycosyltransferases involved in cell wall biogenesis-like protein
Tax=BJP_08E140C01_Elusimicrobia_64_11
MPI_scaffold_171_29
Paenibacillus sp. FSL H7-0357, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29506..30942
DNA (1437bp) protein (479aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ20124.1}; TaxID=1536774 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0357.;"
Putative uncharacterized protein
Displaying 29 items

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