ggKbase home page

MPI_scaffold_1171_8

Organism: MPI_Chloroflexi_35_7_partial

partial RP 14 / 55 MC: 3 BSCG 18 / 51 MC: 3 ASCG 5 / 38 MC: 2
Location: comp(6285..6632)

Top 3 Functional Annotations

Value Algorithm Source
Marine sediment metagenome DNA, contig: S06H3_S00996 {ECO:0000313|EMBL:GAI31324.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 114.0
  • Bit_score: 157
  • Evalue 1.00e-35
rplT; 50S ribosomal protein L20 KEGG
DB: KEGG
  • Identity: 58.3
  • Coverage: 115.0
  • Bit_score: 129
  • Evalue 7.70e-28
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 alias=ACD7_C00034G00022,ACD7_706.42086.77G0022,ACD7_706.42086.77_22 id=129993 tax=ACD7 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 134
  • Evalue 2.70e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 348
ATGGTAAGAGTAAAAAGAGGCGTTGCCGCAAACAAAAGAAGAAAGAAAGTTATTAAAGCTGCTAAAGGATATAAGTGGAGTAGAAAATCCAAGTATGTTGCAGCAAAACAAGCATTATTAAAAGCATGGACTTATGCTTATAGAGATAGAAAGGTTAAAAAAAGAGCCAAAAGACAACTTTGGCAAGTTCAAATTAATGCAATCTGTAGACAAAATGGAACAACTTACAGCAAATTTATTGCTGGATTAAAAAAGAATTCTATTGAAGTAGATAGAAAGATATTGTCTCAATTAGCTAGAGAAAACAGTGACTTGTTTATAAAAATTTTAGACAAGGCGAAGGCGTAA
PROTEIN sequence
Length: 116
MVRVKRGVAANKRRKKVIKAAKGYKWSRKSKYVAAKQALLKAWTYAYRDRKVKKRAKRQLWQVQINAICRQNGTTYSKFIAGLKKNSIEVDRKILSQLARENSDLFIKILDKAKA*