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MPI_scaffold_1171

Alias: MPI_nov_32_7_4

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPI_scaffold_1171_1
RBG_13_RIF_OD1_07_37_56_curated, RIF-OD1-7, Parcubacteria, Bacteria

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comp(3..623)
-----------------
DNA (621bp)
protein (207aa)
aminodeoxychorismate lyase; K07082 UPF0755 protein Tax=RBG_13_RIF_OD1_07_37_56_curated
aminodeoxychorismate lyase
Putative uncharacterized protein alias=gwe2_scaffold_359_30 id=1987456 tax=GWE2_OD1_38_254 species=Carboxydothermus hydrogenoformans Z-2901 genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes
MPI_scaffold_1171_2
R_RIF_OD1_06_34_10, RIF-OD1-6, Parcubacteria, Bacteria

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865..1332
-----------------
DNA (468bp)
protein (156aa)
greA; transcription elongation factor; K03624 transcription elongation factor GreA Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_34_10_curated
greA; Transcription elongation factor GreA
GreA/GreB family elongation factor; K03624 transcription elongation factor GreA alias=ACD37_C00162G00002,ACD37_500188.4918.6G0002,ACD37_500188.4918.6_2 id=42002 tax=ACD37 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
MPI_scaffold_1171_3
CG_CPR10_01, CG_CPR10, Bacteria

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1319..2068
-----------------
DNA (750bp)
protein (250aa)
hypothetical protein Tax=CG_CPR10_01
hypothetical protein
Uncharacterized protein
MPI_scaffold_1171_4
RBG_13_RIF_OD1_07_42_11_curated, RIF-OD1-7, Parcubacteria, Bacteria

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2131..3141
-----------------
DNA (1011bp)
protein (337aa)
hypothetical protein; K07027 Tax=RBG_13_RIF_OD1_07_42_11_curated
hypothetical protein
Putative uncharacterized protein
MPI_scaffold_1171_5
CG_CPR10_01, CG_CPR10, Bacteria

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3134..3754
-----------------
DNA (621bp)
protein (207aa)
hypothetical protein Tax=CG_CPR10_01
hypothetical protein
Putative uncharacterized protein alias=gwe2_scaffold_297_19 id=1947699 tax=GWE2_OD1_40_11 species=Methanosaeta harundinacea 6Ac genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota
MPI_scaffold_1171_6

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3751..5436
-----------------
DNA (1686bp)
protein (562aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN97073.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PHP domain-containing protein
PHP domain protein
MPI_scaffold_1171_7
Caldisericum exile, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

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5426..6316
-----------------
DNA (891bp)
protein (297aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL80718.1}; TaxID=511051 species="Bacteria; Caldiserica; Caldisericia; Caldisericales; Caldisericaceae; Caldisericum.;" source="Caldisericum exile (strain DS
Uncharacterized protein
MPI_scaffold_1171_8

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comp(6285..6632)
-----------------
DNA (348bp)
protein (116aa)
Marine sediment metagenome DNA, contig: S06H3_S00996 {ECO:0000313|EMBL:GAI31324.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rplT; 50S ribosomal protein L20
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 alias=ACD7_C00034G00022,ACD7_706.42086.77G0022,ACD7_706.42086.77_22 id=129993 tax=ACD7 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_group=OD1-i organism_desc=OD1-i
MPI_scaffold_1171_9
R_RIF_OD1_07_48_27b, RIF-OD1-7, Parcubacteria, Bacteria

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comp(6637..6828)
-----------------
DNA (192bp)
protein (64aa)
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_48_27b_curated
LSU ribosomal protein L35p
50S ribosomal protein L35
MPI_scaffold_1171_10
R_RIF_OD1_07_41_9, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(6830..7339)
-----------------
DNA (510bp)
protein (170aa)
translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_07_41_9_curated
translation initiation factor IF-3
translation initiation factor IF-3; K02520 translation initiation factor IF-3 alias=ACD18_C00038G00007,ACD18_41.6488.22G0007,ACD18_41.6488.22_7 id=13265 tax=ACD18 species=Roseiflexus sp. RS-1 genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi organism_group=OD1, not OD1-i organism_desc= OD1
MPI_scaffold_1171_11
CG_CPR10_01, CG_CPR10, Bacteria

Not on your lists

comp(7692..8147)
-----------------
DNA (456bp)
protein (152aa)
ssrA-binding protein Tax=CG_CPR10_01
SsrA-binding protein
SsrA-binding protein alias=gwe2_scaffold_594_22 id=2104221 tax=GWE2_OD1_ACD81_47_12 species=Deferribacter desulfuricans SSM1 genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres
MPI_scaffold_1171_12
CG_CPR03_03, CG_CPR03, Bacteria

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8183..9748
-----------------
DNA (1566bp)
protein (522aa)
arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=CG_CPR03_03
arginyl-tRNA synthetase (EC:6.1.1.19)
bha:BH3808 argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] alias=ACD11_C00029G00006,ACD11_12019.21524.28G0006,ACD11_12019.21524.28_6 id=3344 tax=ACD11 species=Paenibacillus sp. oral taxon 786 genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
MPI_scaffold_1171_13
GWD2_OD1_43_18, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

9835..10899
-----------------
DNA (1065bp)
protein (355aa)
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:KKT04537.1}; TaxID=1619051 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWD2_43_18.;"
Fic family protein
Filamentation induced by cAMP protein Fic
Displaying 13 items

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